ACOC_0000653601 (Angiostrongylus costaricensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 ACOC_0000653601 T335930_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0000653601-mRNA-1 Sox 33 97

Links

Other Sox family TFs
Other Angiostrongylus costaricensis TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC038 Arabidopsis thaliana AT2G24430 D
anac058 Arabidopsis thaliana AT3G18400 D
anac058 Arabidopsis lyrata Al_scaffold_0003_1942 I
AMTR_s00025p00174590 Amborella trichopoda AMTR_s00025p00174590 I
AMTR_s00079p00099620 Amborella trichopoda AMTR_s00079p00099620 I
BGIOSGA013151 Oryza indica BGIOSGA013151 I
Bo01320s020 Brassica oleracea Bo01320s020 I
Bo1g117610 Brassica oleracea Bo1g117610 I
Bo3g071500 Brassica oleracea Bo3g071500 I
Bo8g099810 Brassica oleracea Bo8g099810 I
Bra001705 Brassica rapa Bra001705 I
Bra003023 Brassica rapa Bra003023 I
Bra007855 Brassica rapa Bra007855 I
Bra022319 Brassica rapa Bra022319 I
Bra032095 Brassica rapa Bra032095 I
Bra037585 Brassica rapa Bra037585 I
BRADI1G14467 Brachypodium distachyon BRADI1G14467 I
F775_05949 Aegilops tauschii F775_05949 I
ANAC039 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4000352 I
GLYMA04G08320 Glycine max GLYMA04G08320 I
GLYMA06G08440 Glycine max GLYMA06G08440 I
GLYMA14G20276 Glycine max GLYMA14G20276 I
GSMUA_Achr10G19900_001 Musa acuminata GSMUA_Achr10G19900_001 I
GSMUA_Achr7G19680_001 Musa acuminata GSMUA_Achr7G19680_001 I
GSMUA_Achr8G18420_001 Musa acuminata GSMUA_Achr8G18420_001 I
LPERR03G21900 Leersia perrieri LPERR03G21900 I
MLOC_68284 Hordeum vulgare MLOC_68284 I
MTR_3g109340 Medicago truncatula MTR_3g109340 I
MTR_4g108760 Medicago truncatula MTR_4g108760 I
OB03G34470 Oryza brachyantha OB03G34470 I
OBART03G26480 Oryza barthii OBART03G26480 I
OGLUM03G27330 Oryza glumaepatula OGLUM03G27330 I
OMERI03G23890 Oryza meridionalis OMERI03G23890 I
ONIVA03G27500 Oryza nivara ONIVA03G27500 I
OPUNC03G24220 Oryza punctata OPUNC03G24220 I
ORGLA03G0246300 Oryza glaberrima ORGLA03G0246300 I
ORUFI03G27440 Oryza rufipogon ORUFI03G27440 I
OS03G0624600 Oryza sativa OS03G0624600 I
PGSC0003DMG400005384 Solanum tuberosum PGSC0003DMG400005384 I
PGSC0003DMG400014845 Solanum tuberosum PGSC0003DMG400014845 I
PGSC0003DMG400028779 Solanum tuberosum PGSC0003DMG400028779 I
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I
PGSC0003DMG400033047 Solanum tuberosum PGSC0003DMG400033047 I
POPTR_0006s29180 Populus trichocarpa POPTR_0006s29180 I
POPTR_0012s01610 Populus trichocarpa POPTR_0012s01610 I
POPTR_0012s05280 Populus trichocarpa POPTR_0012s05280 I
POPTR_0015s02170 Populus trichocarpa POPTR_0015s02170 I
POPTR_0015s03700 Populus trichocarpa POPTR_0015s03700 I
POPTR_0018s03910 Populus trichocarpa POPTR_0018s03910 I
PRUPE_ppa025916mg Prunus persica PRUPE_ppa025916mg I
Sb01g014310 Sorghum bicolor Sb01g014310 I
Si036535m.g Setaria italica Si036535m.g I
Solyc06g069100.1 Solanum lycopersicum Solyc06g069100.1 I
Solyc06g069710.2 Solanum lycopersicum Solyc06g069710.2 I
Solyc08g006020.2 Solanum lycopersicum Solyc08g006020.2 I
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I
Solyc12g036480.1 Solanum lycopersicum Solyc12g036480.1 I
TCM_012350 Theobroma cacao TCM_012350 I
TCM_036791 Theobroma cacao TCM_036791 I
Traes_4AL_B44DF4ACC Triticum aestivum Traes_4AL_B44DF4ACC I
Traes_4BS_373BDBA94 Triticum aestivum Traes_4BS_373BDBA94 I
TRIUR3_27612 Triticum urartu TRIUR3_27612 I
ANAC039 Vitis vinifera VIT_04s0008g02710 I
anac058 Vitis vinifera VIT_17s0000g03660 I
Ca_11021 Cicer arietinum Ca_11021 I
Cla019391 Citrullus lanatus Cla019391 I
Cla022572 Citrullus lanatus Cla022572 I
Pm005091 Prunus mume Pm005091 I
28226.m000851 Ricinus communis 28226.m000851 I
29974.m000235 Ricinus communis 29974.m000235 I
30138.m004055 Ricinus communis 30138.m004055 I
cassava17517.valid.m1 Manihot esculenta cassava17517.valid.m1 I
cassava18338.valid.m1 Manihot esculenta cassava18338.valid.m1 I
cassava2919.m1 Manihot esculenta cassava2919.m1 I
cassava9086.m1 Manihot esculenta cassava9086.m1 I
Cucsa.161510 Cucumis sativus Cucsa.161510 I
Cucsa.197830 Cucumis sativus Cucsa.197830 I
mgf021065m Mimulus guttatus mgf021065m I
mgf021404m Mimulus guttatus mgf021404m I
mgf025158m Mimulus guttatus mgf025158m I
Aquca_018_00116 Aquilegia coerulea Aquca_018_00116 I
Aquca_026_00305 Aquilegia coerulea Aquca_026_00305 I
Bostr.19424s0822 Boechera stricta Bostr.19424s0822 I
Bostr.26675s0262 Boechera stricta Bostr.26675s0262 I
Bostr.27895s0039 Boechera stricta Bostr.27895s0039 I
Cagra.1681s0009 Capsella grandiflora Cagra.1681s0009 I
Cagra.4091s0015 Capsella grandiflora Cagra.4091s0015 I
Carubv10015990m.g Capsella rubella Carubv10015990m.g I
Carubv10025508m.g Capsella rubella Carubv10025508m.g I
Ciclev10008885m.g Citrus clementina Ciclev10008885m.g I
Ciclev10020480m.g Citrus clementina Ciclev10020480m.g I
Ciclev10023578m.g Citrus clementina Ciclev10023578m.g I
Eucgr.B00724 Eucalyptus grandis Eucgr.B00724 I
Eucgr.C02105 Eucalyptus grandis Eucgr.C02105 I
Eucgr.K02225 Eucalyptus grandis Eucgr.K02225 I
evm.TU.supercontig_244.7 Carica papaya evm.TU.supercontig_244.7 I
evm.TU.supercontig_3.509 Carica papaya evm.TU.supercontig_3.509 I
gene08765-v1.0-hybrid Fragaria vesca gene08765-v1.0-hybrid I
gene26043-v1.0-hybrid Fragaria vesca gene26043-v1.0-hybrid I
Gorai.006G060900 Gossypium raimondii Gorai.006G060900 I
Gorai.010G124100 Gossypium raimondii Gorai.010G124100 I
Lus10001648.g Linum usitatissimum Lus10001648.g I
Lus10009029.g Linum usitatissimum Lus10009029.g I
Lus10009669.g Linum usitatissimum Lus10009669.g I
Lus10020165.g Linum usitatissimum Lus10020165.g I
Lus10021659.g Linum usitatissimum Lus10021659.g I
Lus10026966.g Linum usitatissimum Lus10026966.g I
Lus10027227.g Linum usitatissimum Lus10027227.g I
MDP0000153949 Malus domestica MDP0000153949 I
MDP0000232008 Malus domestica MDP0000232008 I
MDP0000246482 Malus domestica MDP0000246482 I
MDP0000690168 Malus domestica MDP0000690168 I
orange1.1g017827m.g Citrus sinensis orange1.1g017827m.g I
orange1.1g037591m.g Citrus sinensis orange1.1g037591m.g I
Pavir.Ia01262 Panicum virgatum Pavir.Ia01262 I
Pavir.Ib03976 Panicum virgatum Pavir.Ib03976 I
SapurV1A.0263s0310 Salix purpurea SapurV1A.0263s0310 I
SapurV1A.0346s0160 Salix purpurea SapurV1A.0346s0160 I
SapurV1A.0377s0130 Salix purpurea SapurV1A.0377s0130 I
SapurV1A.0719s0060 Salix purpurea SapurV1A.0719s0060 I
SapurV1A.1146s0010 Salix purpurea SapurV1A.1146s0010 I
SapurV1A.1285s0100 Salix purpurea SapurV1A.1285s0100 I
SapurV1A.1363s0020 Salix purpurea SapurV1A.1363s0020 I
SapurV1A.1381s0050 Salix purpurea SapurV1A.1381s0050 I
SapurV1A.1381s0060 Salix purpurea SapurV1A.1381s0060 I
Thhalv10000520m.g Eutrema salsugineum Thhalv10000520m.g I
Thhalv10011708m.g Eutrema salsugineum Thhalv10011708m.g I
Thhalv10021200m.g Eutrema salsugineum Thhalv10021200m.g I
PK02366.1 Cannabis sativa PK02366.1 I
chr1.LjT35C22.60.nc Lotus japonicus chr1.LjT35C22.60.nc I