CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BTMF_0000256101
(
Brugia timori
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
BTMF_0000256101
T336082_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BTMF_0000256101-mRNA-1
Sox
20
89
RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAERYQAEVAAYG
Links
Other
Sox
family TFs
Other
Brugia timori
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_42821
Hordeum vulgare
MLOC_42821
I
0.433
hmgb2a
Danio rerio
ENSDARG00000029722
N
0.453
ENSOANG00000000353
Ornithorhynchus anatinus
ENSOANG00000000353
N
0.489
F775_20402
Aegilops tauschii
F775_20402
N
0.433
Traes_6BS_165C5AFD9
Triticum aestivum
Traes_6BS_165C5AFD9
N
0.433
Traes_6DS_C7F653F0F
Triticum aestivum
Traes_6DS_C7F653F0F
N
0.433
GPLIN_001135700
Globodera pallida
GPLIN_001135700
N
0.460
HCOI01912700
Haemonchus contortus
HCOI01912700
N
0.640
HCOI01913400
Haemonchus contortus
HCOI01913400
N
0.640
OESDEN_15244
Oesophagostomum dentatum
OESDEN_15244
N
0.640
SVUK_0000870501
Strongylus vulgaris
SVUK_0000870501
N
0.494