CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F775_20402
(
Aegilops tauschii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
F775_20402
T329490_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMT06268
Sox
236
303
PKPNRSGYNFFFQDQHRKLKPDYPGQDRLISKMIGERWNNLSPEDKAVYQERGVQDKERYQSQLAAYK
Links
Other
Sox
family TFs
Other
Aegilops tauschii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_6DS_C7F653F0F
Triticum aestivum
Traes_6DS_C7F653F0F
N
0.741
Traes_6BS_165C5AFD9
Triticum aestivum
Traes_6BS_165C5AFD9
N
0.708
MLOC_42821
Hordeum vulgare
MLOC_42821
I
0.703
PDK_20s1400562g001
Phoenix dactylifera
PDK_20s1400562g001
N
0.610
POPTR_0017s08230
Populus trichocarpa
POPTR_0017s08230
N
0.561
PGSC0003DMG402018896
Solanum tuberosum
PGSC0003DMG402018896
N
0.516
chr5.CM0260.560.nd
Lotus japonicus
chr5.CM0260.560.nd
N
0.510
PDK_20s1331851g001
Phoenix dactylifera
PDK_20s1331851g001
N
0.491
Eucgr.F01991
Eucalyptus grandis
Eucgr.F01991
N
0.463
BTMF_0000256101
Brugia timori
BTMF_0000256101
N
0.433
SMU15029818
Schmidtea mediterranea
SMU15029818
I
0.427