CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BXY_1555400
(
Bursaphelenchus xylophilus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
BXY_1555400
T336106_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BXY_1555400.1
Sox
49
115
GKTSPYGFFVKMCYEEHKRKFPHENVLVTEISKKCSEKWKTMNEIEKKRFFDLAQKDAERYHAEITA
BXY_1555400.1
Sox
135
203
PKRALSAFFFFSNEQRNKIQSQYPSWKVGQIAQELGRAWKALSEEERMVYEKKAVDDKERYNMEMKSYR
Links
Other
Sox
family TFs
Other
Bursaphelenchus xylophilus
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS06G0675600
Oryza sativa
OS06G0675600
N
OPUNC02G04160
Oryza punctata
OPUNC02G04160
N
OPUNC02G33860
Oryza punctata
OPUNC02G33860
N
OPUNC06G22270
Oryza punctata
OPUNC06G22270
N
OPUNC08G05520
Oryza punctata
OPUNC08G05520
N
ORGLA02G0046100
Oryza glaberrima
ORGLA02G0046100
N
ORGLA02G0320500
Oryza glaberrima
ORGLA02G0320500
N
ORGLA06G0205600
Oryza glaberrima
ORGLA06G0205600
N
ORGLA08G0051100
Oryza glaberrima
ORGLA08G0051100
N
ORUFI02G05100
Oryza rufipogon
ORUFI02G05100
N
ORUFI02G38340
Oryza rufipogon
ORUFI02G38340
N
ORUFI06G26420
Oryza rufipogon
ORUFI06G26420
N
ORUFI08G06500
Oryza rufipogon
ORUFI08G06500
N
OS02G0810900
Oryza sativa
OS02G0810900
N
ONIVA08G05790
Oryza nivara
ONIVA08G05790
N
Sb06g028800
Sorghum bicolor
Sb06g028800
N
Si014180m.g
Setaria italica
Si014180m.g
N
Traes_6AL_B272C86BE
Triticum aestivum
Traes_6AL_B272C86BE
N
Traes_6AL_B92597EA9
Triticum aestivum
Traes_6AL_B92597EA9
N
Traes_6BL_99F790D57
Triticum aestivum
Traes_6BL_99F790D57
N
Traes_6DL_1ABE78799
Triticum aestivum
Traes_6DL_1ABE78799
N
Traes_6DL_8A1342D56
Triticum aestivum
Traes_6DL_8A1342D56
N
TRIUR3_23299
Triticum urartu
TRIUR3_23299
N
TRIUR3_32754
Triticum urartu
TRIUR3_32754
N
Lus10003548.g
Linum usitatissimum
Lus10003548.g
N
Lus10033905.g
Linum usitatissimum
Lus10033905.g
N
Pavir.Fb00532
Panicum virgatum
Pavir.Fb00532
N
PDK_20s1665101g001
Phoenix dactylifera
PDK_20s1665101g001
N
OBART02G05020
Oryza barthii
OBART02G05020
N
BGIOSGA009257
Oryza indica
BGIOSGA009257
N
BGIOSGA023457
Oryza indica
BGIOSGA023457
N
BGIOSGA027481
Oryza indica
BGIOSGA027481
N
F775_08585
Aegilops tauschii
F775_08585
N
F775_17109
Aegilops tauschii
F775_17109
N
F775_18200
Aegilops tauschii
F775_18200
N
GRMZM2G156977
Zea mays
GRMZM2G156977
N
GSMUA_Achr5G00500_001
Musa acuminata
GSMUA_Achr5G00500_001
N
GSMUA_Achr6G31350_001
Musa acuminata
GSMUA_Achr6G31350_001
N
LPERR08G05360
Leersia perrieri
LPERR08G05360
N
MLOC_5165
Hordeum vulgare
MLOC_5165
N
OB02G43380
Oryza brachyantha
OB02G43380
N
OB08G15810
Oryza brachyantha
OB08G15810
N
BGIOSGA007071
Oryza indica
BGIOSGA007071
N
OBART02G36830
Oryza barthii
OBART02G36830
N
OBART06G24550
Oryza barthii
OBART06G24550
N
OBART08G05780
Oryza barthii
OBART08G05780
N
OGLUM06G25850
Oryza glumaepatula
OGLUM06G25850
N
OGLUM08G06200
Oryza glumaepatula
OGLUM08G06200
N
OLONG_016454
Oryza longistaminata
OLONG_016454
N
OMERI02G05870
Oryza meridionalis
OMERI02G05870
N
OMERI02G34720
Oryza meridionalis
OMERI02G34720
N
OMERI06G24740
Oryza meridionalis
OMERI06G24740
N
ONIVA02G05190
Oryza nivara
ONIVA02G05190
N
ONIVA02G35380
Oryza nivara
ONIVA02G35380
N
ONIVA02G39640
Oryza nivara
ONIVA02G39640
N