CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D917_04157
(
Trichinella nativa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
D917_04157
T336165_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_04157
Sox
236
284
LCRPVSAYALFFRDTQATIKGQNPNASFGEVSKIVATLWDGLNADAKNV
D917_04157
Sox
327
358
NNLTSSERLFVVYKQKTESAKKDYLKQLAAYR
Links
Other
Sox
family TFs
Other
Trichinella nativa
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AtbZIP70
Arabidopsis thaliana
AT5G60830
N
0.000
Bo7g098020
Brassica oleracea
Bo7g098020
N
0.000
Bra013005
Brassica rapa
Bra013005
N
0.000
Bostr.26833s0155
Boechera stricta
Bostr.26833s0155
N
0.000
Cagra.2519s0054
Capsella grandiflora
Cagra.2519s0054
N
0.000
Carubv10028041m.g
Capsella rubella
Carubv10028041m.g
N
0.000