SCUD_0001691501 (Schistosoma curassoni)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SCUD_0001691501 T336927_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.424 0.338
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SCUD_0001691501-mRNA-1 Sox 44 111

Links

Other Sox family TFs
Other Schistosoma curassoni TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA03G11650 Oryza nivara ONIVA03G11650 N
Pavir.Ia03883 Panicum virgatum Pavir.Ia03883 N
TRIUR3_23242 Triticum urartu TRIUR3_23242 N
Traes_4DL_879C8557D Triticum aestivum Traes_4DL_879C8557D N
Traes_4BL_DCD5FA440 Triticum aestivum Traes_4BL_DCD5FA440 N
Traes_4AS_636DF8B4C Triticum aestivum Traes_4AS_636DF8B4C N
Si034492m.g Setaria italica Si034492m.g N
Sb01g040730 Sorghum bicolor Sb01g040730 N
ORGLA03G0105900 Oryza glaberrima ORGLA03G0105900 N
OPUNC03G10640 Oryza punctata OPUNC03G10640 N
BGIOSGA012253 Oryza indica BGIOSGA012253 N
OMERI03G10300 Oryza meridionalis OMERI03G10300 N
OLONG_007342 Oryza longistaminata OLONG_007342 N
OGLUM03G10940 Oryza glumaepatula OGLUM03G10940 N
OB03G21220 Oryza brachyantha OB03G21220 N
MLOC_51314 Hordeum vulgare MLOC_51314 N
GRMZM2G001663 Zea mays GRMZM2G001663 N
F775_07027 Aegilops tauschii F775_07027 N
BRADI1G67740 Brachypodium distachyon BRADI1G67740 N