Pavir.Ia03883 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.Ia03883 T181769_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia03883.1.p FAR1 69 162
Pavir.Ia03883.1.p FAR1 206 300
Pavir.Ia03883.2.p FAR1 69 162
Pavir.Ia03883.2.p FAR1 206 300
Pavir.Ia03883.3.p FAR1 69 162
Pavir.Ia03883.3.p FAR1 206 300
Pavir.Ia03883.4.p FAR1 69 162
Pavir.Ia03883.4.p FAR1 206 300

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si034492m.g Setaria italica Si034492m.g N 0.967
GRMZM2G001663 Zea mays GRMZM2G001663 N 0.939
Sb01g040730 Sorghum bicolor Sb01g040730 N 0.928
Traes_4DL_879C8557D Triticum aestivum Traes_4DL_879C8557D N 0.900
MLOC_51314 Hordeum vulgare MLOC_51314 N 0.894
Traes_4AS_636DF8B4C Triticum aestivum Traes_4AS_636DF8B4C N 0.894
Traes_4BL_DCD5FA440 Triticum aestivum Traes_4BL_DCD5FA440 N 0.894
BRADI1G67740 Brachypodium distachyon BRADI1G67740 N 0.889
OB03G21220 Oryza brachyantha OB03G21220 N 0.867
OPUNC03G10640 Oryza punctata OPUNC03G10640 N 0.867
BGIOSGA012253 Oryza indica BGIOSGA012253 N 0.861
OGLUM03G10940 Oryza glumaepatula OGLUM03G10940 N 0.861
OLONG_007342 Oryza longistaminata OLONG_007342 N 0.861
ONIVA03G11650 Oryza nivara ONIVA03G11650 N 0.861
ORGLA03G0105900 Oryza glaberrima ORGLA03G0105900 N 0.861
OS03G0255400 Oryza sativa OS03G0255400 N 0.861
OMERI03G10300 Oryza meridionalis OMERI03G10300 N 0.856
TRIUR3_23242 Triticum urartu TRIUR3_23242 N 0.722
F775_07027 Aegilops tauschii F775_07027 N 0.717