CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORGLA03G0105900
(
Oryza glaberrima
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
ORGLA03G0105900
T179953_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA03G0105900.1
FAR1
70
163
DFYSKYARYAGFRIRISRYTRSRRDNSIISRRIVCSKEGFHETRDCENLHVDQKQQARVGTRVGCKAMLMIKKFGPDKWVVTKFIKIHNHGPVP
ORGLA03G0105900.1
FAR1
206
301
LFYINYARVNGFRARISRYCRSRRDNSIISRQIVCSKEGFREVRARKDITDGGKTTKRPRMITRVGCKAMIVVKRMNSGKWMVSKFEKEHNHSLLS
Links
Other
FAR1
family TFs
Other
Oryza glaberrima
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA012253
Oryza indica
BGIOSGA012253
N
0.994
OGLUM03G10940
Oryza glumaepatula
OGLUM03G10940
N
0.994
OLONG_007342
Oryza longistaminata
OLONG_007342
N
0.994
ONIVA03G11650
Oryza nivara
ONIVA03G11650
N
0.994
OS03G0255400
Oryza sativa
OS03G0255400
N
0.994
OMERI03G10300
Oryza meridionalis
OMERI03G10300
N
0.989
OPUNC03G10640
Oryza punctata
OPUNC03G10640
N
0.989
OB03G21220
Oryza brachyantha
OB03G21220
N
0.978
Traes_4BL_DCD5FA440
Triticum aestivum
Traes_4BL_DCD5FA440
N
0.906
Traes_4DL_879C8557D
Triticum aestivum
Traes_4DL_879C8557D
N
0.906
Traes_4AS_636DF8B4C
Triticum aestivum
Traes_4AS_636DF8B4C
N
0.900
MLOC_51314
Hordeum vulgare
MLOC_51314
N
0.894
BRADI1G67740
Brachypodium distachyon
BRADI1G67740
N
0.889
Si034492m.g
Setaria italica
Si034492m.g
N
0.889
GRMZM2G001663
Zea mays
GRMZM2G001663
N
0.878
Pavir.Ia03883
Panicum virgatum
Pavir.Ia03883
N
0.861
Sb01g040730
Sorghum bicolor
Sb01g040730
N
0.844
TRIUR3_23242
Triticum urartu
TRIUR3_23242
N
0.744
F775_07027
Aegilops tauschii
F775_07027
N
0.739