CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000001594
(
Xiphophorus maculatus
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02864 (STAT_bind)
IPR013801
ENSXMAG00000001594
T337730_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STAT1
M08171_2.00
Homo sapiens
HTTCCYRGAAV
BTTCYRGGAAD
ChIP-seq
Mathelier et al.(2014)
MA0137.3
0.709
0.709
STAT1
M08013_2.00
Homo sapiens
NBBNBTTCCHRGAADNSHNNN
NNNDSNHTTCYDGGAAVNVVN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_STAT1_Stanford
0.709
0.709
STAT1
M08014_2.00
Homo sapiens
YTTCCYRGAAR
YTTCYRGGAAR
ChIP-seq
Gerstein et al.(2012)
K562_STAT1_Stanford
0.709
0.709
STAT1
M08229_2.00
Homo sapiens
NTTCYNRGAA
TTCYNRGAAN
ChIP-seq
Contrino et al.(2012)
Mv124
0.709
0.709
STAT1
M08230_2.00
Homo sapiens
RGTTTCRBTT
AAVYGAAACY
ChIP-seq
Contrino et al.(2012)
Mv125
0.709
0.709
STAT1
M09411_2.00
Homo sapiens
HBHNYTTCCNRGAARHSHN
NDSDYTTCYNGGAARNDVD
Misc
Kulakovskiy et al.(2013)
STAT1_HUMAN.H11MO.0.A
0.709
0.709
Stat1
M09422_2.00
Mus musculus
HNDBYNTNDBTTTCHNTTYYYY
RRRRAANDGAAAVHNANRVHND
Misc
Kulakovskiy et al.(2013)
STAT1_MOUSE.H11MO.0.A
0.709
0.709
STAT1
M09642_2.00
Homo sapiens
NHTTCYNRGAADNN
NNHTTCYNRGAADN
Misc
Heinz et al.(2010)
HelaS3-STAT1_GSE12782
0.709
0.709
STAT1
M11348_2.00
Homo sapiens
NSNYAHTTCCSGGAADBBNHV
BDNVVHTTCCSGGAADTRNSN
Transfac
Matys et al.(2006)
V$STAT1_01
0.709
0.709
STAT1
M11349_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_02
0.709
0.709
STAT1
M11350_2.00
Homo sapiens
VNHTTMBN
NVKAADNB
Transfac
Matys et al.(2006)
V$STAT1_03
0.709
0.709
STAT1
M11351_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_05
0.709
0.709
STAT1
M11352_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_07
0.709
0.709
STAT1
M11353_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_Q4
0.709
0.709
STAT1
M11354_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_Q6
0.709
0.709
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000001637
STAT
314
566
LVVERQPCMPTHPQRPLVLKTGVQFTVKLRFLVKLHEFNYQLKVKAVFDKDVTEKKGFRKFNILGTNTKVMNMEESNGSLAAEFRHLQLKEQKLAGNRTNEGPLIVTEELHSLSFESELHLNQSGSPGLHIKVEAMAMPLVVISNVCQLPSGWASILWYNMLTTEPKNLKFFLSPPSAKWSQLSEVLSWQFSSVTKRGLNQEQLNMLADKLLGAKAQRNPDGTIPWTKFCKQSANEKSFPFWLWIEGILDLIK
Links
Other
STAT
family TFs
Other
Xiphophorus maculatus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PATZ1
Homo sapiens
ENSG00000100105
D
0.000
PATZ1
Myotis lucifugus
ENSMLUG00000009942
I
0.000
PATZ1
Macaca mulatta
ENSMMUG00000013911
I
0.000
Patz1
Mus musculus
ENSMUSG00000020453
I
0.000
PATZ1
Canis familiaris
ENSCAFG00000013087
I
0.000
ENSPSIG00000011562
Pelodiscus sinensis
ENSPSIG00000011562
I
0.000
ENSOARG00000010061
Ovis aries
ENSOARG00000010061
N
0.000
Ogr03452
Ophisaurus gracilis
Ogr03452
N
0.000
Cmyd_10005165
Chelonia mydas
Cmyd_10005165
N
0.000
Alligator_sinensis_CCG014139.1
Alligator sinensis
Alligator_sinensis_CCG014139.1
N
0.000
PATZ1
Taeniopygia guttata
ENSTGUG00000009749
N
0.000
PATZ1
Sus scrofa
ENSSSCG00000010027
N
0.000
Patz1
Rattus norvegicus
ENSRNOG00000018709
N
0.000
PATZ1
Ochotona princeps
ENSOPRG00000002286
N
0.000
PATZ1
Oryctolagus cuniculus
ENSOCUG00000002323
N
0.000
ENSMPUG00000012814
Mustela putorius furo
ENSMPUG00000012814
N
0.000
PATZ1
Felis catus
ENSFCAG00000030253
N
0.000
PATZ1
Equus caballus
ENSECAG00000025030
N
0.000
ENSCSAG00000008746
Chlorocebus sabaeus
ENSCSAG00000008746
N
0.000