TBX18 (Tursiops truncatus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSTTRG00000005713 T340584_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX18
M05797_2.00 		Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH		 SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX 		0.920 0.995
TBX18
M11380_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX18_01 		0.920 0.995
TBX18
M05798_2.00 		Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN		 SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX 		0.920 0.995
TBX15
M03554_2.00 		Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT		 SELEX
Jolma et al.(2013)
TBX15_1 		0.901 0.929
TBX15
M03555_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX15_2 		0.901 0.929
TBX15
M05795_2.00 		Homo sapiens
NRSGTGTBAN
NTVACACSYN		 SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX 		0.901 0.929
TBX15
M11378_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_01 		0.901 0.929
TBX15
M11379_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_02 		0.901 0.929
TBX15
M05796_2.00 		Homo sapiens
NDSGYGTBAN
NTVACRCSHN		 SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX 		0.901 0.929
TBX22
M11383_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX22_01 		0.830 0.742
mid
M03994_2.00 		Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1 		0.776 0.604
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.752 0.659
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.752 0.659
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.752 0.659
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.752 0.659
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.752 0.659
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.752 0.659
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.752 0.659
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.752 0.659
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.752 0.659
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.752 0.659
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.752 0.659
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.752 0.659
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.752 0.659
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.752 0.659
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.752 0.659
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.752 0.659
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.752 0.659
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000005395 T-box 146 335

Links

Other T-box family TFs
Other Tursiops truncatus TFs

263 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I
ADAP Arabidopsis thaliana AT1G16060 I
AT1G79700 Arabidopsis thaliana AT1G79700 I
WRI1 Arabidopsis thaliana AT3G54320 I
BGIOSGA028751 Oryza indica BGIOSGA028751 I
BGIOSGA030783 Oryza indica BGIOSGA030783 I
Bo6g067950 Brassica oleracea Bo6g067950 I
Bo8g083590 Brassica oleracea Bo8g083590 I
Bra026082 Brassica rapa Bra026082 I
Bra035137 Brassica rapa Bra035137 I
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I
F775_02400 Aegilops tauschii F775_02400 I
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I
GLYMA02G36880 Glycine max GLYMA02G36880 I
GLYMA07G02380 Glycine max GLYMA07G02380 I
GLYMA08G23630 Glycine max GLYMA08G23630 I
GLYMA17G07860 Glycine max GLYMA17G07860 I
GRMZM2G124524 Zea mays GRMZM2G124524 I
GRMZM2G141219 Zea mays GRMZM2G141219 I
GRMZM2G174834 Zea mays GRMZM2G174834 I
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I
MTR_4g130270 Medicago truncatula MTR_4g130270 I
OB09G17420 Oryza brachyantha OB09G17420 I
OB11G11380 Oryza brachyantha OB11G11380 I
OB12G11690 Oryza brachyantha OB12G11690 I
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I
ONIVA09G10420 Oryza nivara ONIVA09G10420 I
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I
OS08G0442400 Oryza sativa OS08G0442400 I
OS09G0423800 Oryza sativa OS09G0423800 I
OS12G0126300 Oryza sativa OS12G0126300 I
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I
Sb02g025080 Sorghum bicolor Sb02g025080 I
Sb05g001790 Sorghum bicolor Sb05g001790 I
Si030129m.g Setaria italica Si030129m.g I
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I
TCM_027569 Theobroma cacao TCM_027569 I
TCM_044588 Theobroma cacao TCM_044588 I
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I
TRIUR3_01982 Triticum urartu TRIUR3_01982 I
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I
Pm008629 Prunus mume Pm008629 I
Cucsa.170790 Cucumis sativus Cucsa.170790 I
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I
Carubv10018845m.g Capsella rubella Carubv10018845m.g I
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I
Lus10024101.g Linum usitatissimum Lus10024101.g I
Lus10041618.g Linum usitatissimum Lus10041618.g I
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I
PK04008.1 Cannabis sativa PK04008.1 I
PK26651.1 Cannabis sativa PK26651.1 I
BGIOSGA034580 Oryza indica BGIOSGA034580 N
BGIOSGA036704 Oryza indica BGIOSGA036704 N
Bra003178 Brassica rapa Bra003178 N
Bra007066 Brassica rapa Bra007066 N
BRADI2G53070 Brachypodium distachyon BRADI2G53070 N
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N
GRMZM2G451031 Zea mays GRMZM2G451031 N
LPERR01G30020 Leersia perrieri LPERR01G30020 N
LPERR08G13500 Leersia perrieri LPERR08G13500 N
LPERR12G01610 Leersia perrieri LPERR12G01610 N
MTR_4g007770 Medicago truncatula MTR_4g007770 N
OB01G43640 Oryza brachyantha OB01G43640 N
OBART12G01740 Oryza barthii OBART12G01740 N
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N
OMERI08G13500 Oryza meridionalis OMERI08G13500 N
OMERI11G02080 Oryza meridionalis OMERI11G02080 N
OMERI12G00060 Oryza meridionalis OMERI12G00060 N
ONIVA03G39530 Oryza nivara ONIVA03G39530 N
ONIVA08G17820 Oryza nivara ONIVA08G17820 N
ONIVA11G01800 Oryza nivara ONIVA11G01800 N
OPUNC08G14310 Oryza punctata OPUNC08G14310 N
OPUNC11G01540 Oryza punctata OPUNC11G01540 N
OPUNC12G01560 Oryza punctata OPUNC12G01560 N
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N
Sb03g037750 Sorghum bicolor Sb03g037750 N
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N
Si004222m.g Setaria italica Si004222m.g N
Si012026m.g Setaria italica Si012026m.g N
Si026433m.g Setaria italica Si026433m.g N
TRIUR3_24036 Triticum urartu TRIUR3_24036 N
Ca_17532 Cicer arietinum Ca_17532 N
Cla020765 Citrullus lanatus Cla020765 N
Pm017032 Prunus mume Pm017032 N
30069.m000440 Ricinus communis 30069.m000440 N
cassava16315.m1 Manihot esculenta cassava16315.m1 N
Cucsa.282940 Cucumis sativus Cucsa.282940 N
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N
Lus10005253.g Linum usitatissimum Lus10005253.g N
Lus10008939.g Linum usitatissimum Lus10008939.g N
Lus10028880.g Linum usitatissimum Lus10028880.g N
Lus10030671.g Linum usitatissimum Lus10030671.g N
Pavir.Ea03213 Panicum virgatum Pavir.Ea03213 N
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N