ENSSARG00000002128 (Sorex araneus)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 ENSSARG00000002128 T342419_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		1.000 1.000
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		1.000 1.000
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		1.000 1.000
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		1.000 1.000
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		1.000 1.000
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		1.000 1.000
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		1.000 1.000
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		1.000 1.000
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		1.000 1.000
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		1.000 1.000
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.805 0.805
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.805 0.805
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.805 0.805
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000001916 TBP 115 197
ENSSARP00000001916 TBP 205 234

Links

Other TBP family TFs
Other Sorex araneus TFs

260 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK07924.1 Cannabis sativa PK07924.1 D
Pm006838 Prunus mume Pm006838 I
Eucgr.H04693 Eucalyptus grandis Eucgr.H04693 I
Ciclev10031052m.g Citrus clementina Ciclev10031052m.g I
mgf004388m Mimulus guttatus mgf004388m I
mgf000016m Mimulus guttatus mgf000016m I
Cucsa.394720 Cucumis sativus Cucsa.394720 I
cassava29171.valid.m1 Manihot esculenta cassava29171.valid.m1 I
cassava13981.valid.m1 Manihot esculenta cassava13981.valid.m1 I
29929.m004752 Ricinus communis 29929.m004752 I
evm.TU.supercontig_86.17 Carica papaya evm.TU.supercontig_86.17 I
Cla023064 Citrullus lanatus Cla023064 I
Ca_11309 Cicer arietinum Ca_11309 I
VIT_17s0000g10100 Vitis vinifera VIT_17s0000g10100 I
ARR11 Vitis vinifera VIT_01s0010g02230 I
Traes_3DL_D82CA7827 Triticum aestivum Traes_3DL_D82CA7827 I
TRAES3BF107400040CFD_g Triticum aestivum TRAES3BF107400040CFD_g I
TRAES3BF094200030CFD_g Triticum aestivum TRAES3BF094200030CFD_g I
Traes_3B_D9F27151E Triticum aestivum Traes_3B_D9F27151E I
Gorai.005G173300 Gossypium raimondii Gorai.005G173300 I
Lus10006446.g Linum usitatissimum Lus10006446.g I
Lus10011389.g Linum usitatissimum Lus10011389.g I
MDP0000305167 Malus domestica MDP0000305167 I
MDP0000307383 Malus domestica MDP0000307383 I
MDP0000320381 Malus domestica MDP0000320381 I
orange1.1g007940m.g Citrus sinensis orange1.1g007940m.g I
orange1.1g027234m.g Citrus sinensis orange1.1g027234m.g I
Pavir.Ea03527 Panicum virgatum Pavir.Ea03527 I
Pavir.J23046 Panicum virgatum Pavir.J23046 I
SapurV1A.0152s0010 Salix purpurea SapurV1A.0152s0010 I
SapurV1A.0206s0280 Salix purpurea SapurV1A.0206s0280 I
SapurV1A.0629s0180 Salix purpurea SapurV1A.0629s0180 I
LjSGA_022114.1 Lotus japonicus LjSGA_022114.1 I
PDK_20s1379531g004 Phoenix dactylifera PDK_20s1379531g004 I
GRMZM2G177220 Zea mays GRMZM2G177220 I
OGLUM01G45120 Oryza glumaepatula OGLUM01G45120 I
OBART01G40940 Oryza barthii OBART01G40940 I
OB01G49660 Oryza brachyantha OB01G49660 I
MTR_8g079940 Medicago truncatula MTR_8g079940 I
MTR_3g086100 Medicago truncatula MTR_3g086100 I
MLOC_23250 Hordeum vulgare MLOC_23250 I
LPERR01G35510 Leersia perrieri LPERR01G35510 I
GSMUA_Achr8G32070_001 Musa acuminata GSMUA_Achr8G32070_001 I
OLONG_004141 Oryza longistaminata OLONG_004141 I
GRMZM2G100318 Zea mays GRMZM2G100318 I
GLYMA18G01434 Glycine max GLYMA18G01434 I
GLYMA11G37480 Glycine max GLYMA11G37480 I
GLYMA08G10650 Glycine max GLYMA08G10650 I
GLYMA05G27670 Glycine max GLYMA05G27670 I
F775_27736 Aegilops tauschii F775_27736 I
BRADI2G58020 Brachypodium distachyon BRADI2G58020 I
BGIOSGA000304 Oryza indica BGIOSGA000304 I
OMERI01G37950 Oryza meridionalis OMERI01G37950 I
ONIVA01G45980 Oryza nivara ONIVA01G45980 I
OPUNC01G39740 Oryza punctata OPUNC01G39740 I
ORGLA01G0348700 Oryza glaberrima ORGLA01G0348700 I
ORUFI01G44260 Oryza rufipogon ORUFI01G44260 I
RR26 Oryza sativa OS01G0904700 I
PGSC0003DMG400011980 Solanum tuberosum PGSC0003DMG400011980 I
POPTR_0008s18130 Populus trichocarpa POPTR_0008s18130 I
POPTR_0010s06290 Populus trichocarpa POPTR_0010s06290 I
PRUPE_ppa002679mg Prunus persica PRUPE_ppa002679mg I
Sb03g043080 Sorghum bicolor Sb03g043080 I
Si000815m.g Setaria italica Si000815m.g I
Solyc05g014260.2 Solanum lycopersicum Solyc05g014260.2 I
TCM_010701 Theobroma cacao TCM_010701 I
Traes_3AL_9D2735F60 Triticum aestivum Traes_3AL_9D2735F60 I