Cla023064 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla023064 T283341_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07924.1
M01278_2.00 		Cannabis sativa
NGATHYNNN
NNNRDATCN		 PBM
Lambert et al.(2019)
pTH11431 		0.909 1.000
ARR11
M00872_2.00 		Arabidopsis thaliana
NRATHHNNN
NNNDDATYN		 PBM
Franco-Zorrilla et al.(2014)
ARR11 		0.767 0.894
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla023064 Myb 200 250

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA05G27670 Glycine max GLYMA05G27670 I 0.909
GLYMA08G10650 Glycine max GLYMA08G10650 I 0.909
GLYMA11G37480 Glycine max GLYMA11G37480 I 0.909
GLYMA18G01434 Glycine max GLYMA18G01434 I 0.909
MTR_8g079940 Medicago truncatula MTR_8g079940 I 0.909
PRUPE_ppa002679mg Prunus persica PRUPE_ppa002679mg I 0.909
TCM_010701 Theobroma cacao TCM_010701 I 0.909
ARR11 Vitis vinifera VIT_01s0010g02230 I 0.909
Pm006838 Prunus mume Pm006838 I 0.909
cassava13981.valid.m1 Manihot esculenta cassava13981.valid.m1 I 0.909
cassava29171.valid.m1 Manihot esculenta cassava29171.valid.m1 I 0.909
Cucsa.394720 Cucumis sativus Cucsa.394720 I 0.909
evm.TU.supercontig_86.17 Carica papaya evm.TU.supercontig_86.17 I 0.909
Gorai.005G173300 Gossypium raimondii Gorai.005G173300 I 0.909
MDP0000320381 Malus domestica MDP0000320381 I 0.909
PK07924.1 Cannabis sativa PK07924.1 D 0.909
LjSGA_022114.1 Lotus japonicus LjSGA_022114.1 I 0.909
MTR_3g086100 Medicago truncatula MTR_3g086100 I 0.907
BGIOSGA000304 Oryza indica BGIOSGA000304 I 0.898
F775_27736 Aegilops tauschii F775_27736 I 0.898
GRMZM2G100318 Zea mays GRMZM2G100318 I 0.898
GRMZM2G177220 Zea mays GRMZM2G177220 I 0.898
LPERR01G35510 Leersia perrieri LPERR01G35510 I 0.898
MLOC_23250 Hordeum vulgare MLOC_23250 I 0.898
OB01G49660 Oryza brachyantha OB01G49660 I 0.898
OBART01G40940 Oryza barthii OBART01G40940 I 0.898
OGLUM01G45120 Oryza glumaepatula OGLUM01G45120 I 0.898
OLONG_004141 Oryza longistaminata OLONG_004141 I 0.898
OMERI01G37950 Oryza meridionalis OMERI01G37950 I 0.898
ONIVA01G45980 Oryza nivara ONIVA01G45980 I 0.898
OPUNC01G39740 Oryza punctata OPUNC01G39740 I 0.898
ORGLA01G0348700 Oryza glaberrima ORGLA01G0348700 I 0.898
ORUFI01G44260 Oryza rufipogon ORUFI01G44260 I 0.898
RR26 Oryza sativa OS01G0904700 I 0.898
POPTR_0010s06290 Populus trichocarpa POPTR_0010s06290 I 0.898
Si000815m.g Setaria italica Si000815m.g I 0.898
Traes_3AL_9D2735F60 Triticum aestivum Traes_3AL_9D2735F60 I 0.898
Traes_3B_D9F27151E Triticum aestivum Traes_3B_D9F27151E I 0.898
TRAES3BF094200030CFD_g Triticum aestivum TRAES3BF094200030CFD_g I 0.898
TRAES3BF107400040CFD_g Triticum aestivum TRAES3BF107400040CFD_g I 0.898
Traes_3DL_D82CA7827 Triticum aestivum Traes_3DL_D82CA7827 I 0.898
Pavir.Ea03527 Panicum virgatum Pavir.Ea03527 I 0.898
Pavir.J23046 Panicum virgatum Pavir.J23046 I 0.898
SapurV1A.0152s0010 Salix purpurea SapurV1A.0152s0010 I 0.898
SapurV1A.0629s0180 Salix purpurea SapurV1A.0629s0180 I 0.898
POPTR_0008s18130 Populus trichocarpa POPTR_0008s18130 I 0.891
SapurV1A.0206s0280 Salix purpurea SapurV1A.0206s0280 I 0.891
VIT_17s0000g10100 Vitis vinifera VIT_17s0000g10100 I 0.875
Ciclev10031052m.g Citrus clementina Ciclev10031052m.g I 0.875
orange1.1g007940m.g Citrus sinensis orange1.1g007940m.g I 0.875
BRADI2G58020 Brachypodium distachyon BRADI2G58020 I 0.873
GSMUA_Achr8G32070_001 Musa acuminata GSMUA_Achr8G32070_001 I 0.858
Sb03g043080 Sorghum bicolor Sb03g043080 I 0.858
MDP0000305167 Malus domestica MDP0000305167 I 0.856
MDP0000307383 Malus domestica MDP0000307383 I 0.856
mgf000016m Mimulus guttatus mgf000016m I 0.854
Ca_11309 Cicer arietinum Ca_11309 I 0.849
Solyc05g014260.2 Solanum lycopersicum Solyc05g014260.2 I 0.848
29929.m004752 Ricinus communis 29929.m004752 I 0.820
Eucgr.H04693 Eucalyptus grandis Eucgr.H04693 I 0.820
Lus10006446.g Linum usitatissimum Lus10006446.g I 0.820
Lus10011389.g Linum usitatissimum Lus10011389.g I 0.820
PDK_20s1379531g004 Phoenix dactylifera PDK_20s1379531g004 I 0.814
PGSC0003DMG400011980 Solanum tuberosum PGSC0003DMG400011980 I 0.810
GSMUA_Achr3G14630_001 Musa acuminata GSMUA_Achr3G14630_001 I 0.808
mgf004388m Mimulus guttatus mgf004388m I 0.801
Eucgr.H04694 Eucalyptus grandis Eucgr.H04694 I 0.799
Aquca_056_00105 Aquilegia coerulea Aquca_056_00105 I 0.789
Bo6g098710 Brassica oleracea Bo6g098710 I 0.786
Bo6g105120 Brassica oleracea Bo6g105120 I 0.786
Bra004076 Brassica rapa Bra004076 I 0.786
Bra004245 Brassica rapa Bra004245 I 0.786
ARR11 Arabidopsis lyrata scaffold_201596.1 I 0.786
Bostr.26959s0139 Boechera stricta Bostr.26959s0139 I 0.786
Cagra.2261s0012 Capsella grandiflora Cagra.2261s0012 I 0.786
Carubv10020133m.g Capsella rubella Carubv10020133m.g I 0.786
Thhalv10018396m.g Eutrema salsugineum Thhalv10018396m.g I 0.786
Thhalv10000098m.g Eutrema salsugineum Thhalv10000098m.g I 0.777
orange1.1g027234m.g Citrus sinensis orange1.1g027234m.g I 0.773
ARR11 Arabidopsis thaliana AT1G67710 D 0.767
Bo4g157430 Brassica oleracea Bo4g157430 I 0.761
Bra032035 Brassica rapa Bra032035 I 0.761
Aquca_011_00344 Aquilegia coerulea Aquca_011_00344 I 0.760
cassava32312.m1 Manihot esculenta cassava32312.m1 I 0.756
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.706
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.706
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.706
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.706
mgf013006m Mimulus guttatus mgf013006m I 0.696
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.695
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.695
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.695
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.695
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.695
TCM_037098 Theobroma cacao TCM_037098 I 0.695
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.695
Cla021325 Citrullus lanatus Cla021325 I 0.695
29737.m001227 Ricinus communis 29737.m001227 I 0.695
29848.m004559 Ricinus communis 29848.m004559 I 0.695
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.695
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.695
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.695
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.695
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.695
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.695
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.695
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.695
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.695
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.695
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.695
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.695
Lus10019058.g Linum usitatissimum Lus10019058.g I 0.692
MTR_1g013180 Medicago truncatula MTR_1g013180 I 0.689
RR23 Oryza indica BGIOSGA005436 I 0.687
RR22 Oryza indica BGIOSGA022430 I 0.687
F775_19079 Aegilops tauschii F775_19079 I 0.687
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.687
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.687
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.687
OB02G42700 Oryza brachyantha OB02G42700 I 0.687
OB06G14930 Oryza brachyantha OB06G14930 I 0.687
OBART06G05360 Oryza barthii OBART06G05360 I 0.687
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.687
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.687
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.687
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.687
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.687
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.687
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.687
RR23 Oryza sativa OS02G0796500 I 0.687
RR22 Oryza sativa OS06G0183100 I 0.687
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.687
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.687
Si006013m.g Setaria italica Si006013m.g I 0.687
Si016546m.g Setaria italica Si016546m.g I 0.687
TCM_036926 Theobroma cacao TCM_036926 I 0.687
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.687
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.687
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.687
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.687
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.687
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.687
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.687
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.679
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.679
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.679
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.679
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.679
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.679
Cucsa.350850 Cucumis sativus Cucsa.350850 I 0.678
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.678
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.678
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.678
Lus10036303.g Linum usitatissimum Lus10036303.g I 0.677
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.677
ARR12 Arabidopsis thaliana AT2G25180 I 0.672
ARR12 Arabidopsis lyrata fgenesh2_kg.4__435__AT2G25180.1 I 0.672
Cagra.2381s0022 Capsella grandiflora Cagra.2381s0022 I 0.672
Carubv10022837m.g Capsella rubella Carubv10022837m.g I 0.672
AMTR_s00049p00081480 Amborella trichopoda AMTR_s00049p00081480 I 0.671
BRADI3G06120 Brachypodium distachyon BRADI3G06120 I 0.670
F775_13501 Aegilops tauschii F775_13501 I 0.670
GRMZM2G060485 Zea mays GRMZM2G060485 I 0.670
MLOC_3955 Hordeum vulgare MLOC_3955 I 0.670
Sb04g005580 Sorghum bicolor Sb04g005580 I 0.670
Si016630m.g Setaria italica Si016630m.g I 0.670
Traes_6AS_A42E71A00 Triticum aestivum Traes_6AS_A42E71A00 I 0.670
Traes_6BS_B50BEBC7E Triticum aestivum Traes_6BS_B50BEBC7E I 0.670
Traes_6DS_EF4A57213 Triticum aestivum Traes_6DS_EF4A57213 I 0.670
TRIUR3_31924 Triticum urartu TRIUR3_31924 I 0.670
Eucgr.C04050 Eucalyptus grandis Eucgr.C04050 I 0.670
Pavir.Aa03151 Panicum virgatum Pavir.Aa03151 I 0.670
Pavir.Ab00568 Panicum virgatum Pavir.Ab00568 I 0.670
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.668
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.664