cassava32312.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava32312.m1 T284185_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07924.1
M01278_2.00 		Cannabis sativa
NGATHYNNN
NNNRDATCN		 PBM
Lambert et al.(2019)
pTH11431 		0.756 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava32312.m1 Myb 64 120

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr8G32070_001 Musa acuminata GSMUA_Achr8G32070_001 I 0.784
Sb03g043080 Sorghum bicolor Sb03g043080 I 0.784
Solyc05g014260.2 Solanum lycopersicum Solyc05g014260.2 I 0.778
GLYMA05G27670 Glycine max GLYMA05G27670 I 0.756
GLYMA08G10650 Glycine max GLYMA08G10650 I 0.756
GLYMA11G37480 Glycine max GLYMA11G37480 I 0.756
GLYMA18G01434 Glycine max GLYMA18G01434 I 0.756
MTR_8g079940 Medicago truncatula MTR_8g079940 I 0.756
PRUPE_ppa002679mg Prunus persica PRUPE_ppa002679mg I 0.756
TCM_010701 Theobroma cacao TCM_010701 I 0.756
ARR11 Vitis vinifera VIT_01s0010g02230 I 0.756
Cla023064 Citrullus lanatus Cla023064 I 0.756
Pm006838 Prunus mume Pm006838 I 0.756
cassava13981.valid.m1 Manihot esculenta cassava13981.valid.m1 I 0.756
cassava29171.valid.m1 Manihot esculenta cassava29171.valid.m1 I 0.756
Cucsa.394720 Cucumis sativus Cucsa.394720 I 0.756
evm.TU.supercontig_86.17 Carica papaya evm.TU.supercontig_86.17 I 0.756
Gorai.005G173300 Gossypium raimondii Gorai.005G173300 I 0.756
MDP0000320381 Malus domestica MDP0000320381 I 0.756
PK07924.1 Cannabis sativa PK07924.1 D 0.756
LjSGA_022114.1 Lotus japonicus LjSGA_022114.1 I 0.756
MTR_3g086100 Medicago truncatula MTR_3g086100 I 0.754
BGIOSGA000304 Oryza indica BGIOSGA000304 I 0.744
F775_27736 Aegilops tauschii F775_27736 I 0.744
GRMZM2G100318 Zea mays GRMZM2G100318 I 0.744
GRMZM2G177220 Zea mays GRMZM2G177220 I 0.744
LPERR01G35510 Leersia perrieri LPERR01G35510 I 0.744
MLOC_23250 Hordeum vulgare MLOC_23250 I 0.744
OB01G49660 Oryza brachyantha OB01G49660 I 0.744
OBART01G40940 Oryza barthii OBART01G40940 I 0.744
OGLUM01G45120 Oryza glumaepatula OGLUM01G45120 I 0.744
OLONG_004141 Oryza longistaminata OLONG_004141 I 0.744
OMERI01G37950 Oryza meridionalis OMERI01G37950 I 0.744
ONIVA01G45980 Oryza nivara ONIVA01G45980 I 0.744
OPUNC01G39740 Oryza punctata OPUNC01G39740 I 0.744
ORGLA01G0348700 Oryza glaberrima ORGLA01G0348700 I 0.744
ORUFI01G44260 Oryza rufipogon ORUFI01G44260 I 0.744
RR26 Oryza sativa OS01G0904700 I 0.744
POPTR_0010s06290 Populus trichocarpa POPTR_0010s06290 I 0.744
Si000815m.g Setaria italica Si000815m.g I 0.744
Traes_3AL_9D2735F60 Triticum aestivum Traes_3AL_9D2735F60 I 0.744
Traes_3B_D9F27151E Triticum aestivum Traes_3B_D9F27151E I 0.744
TRAES3BF094200030CFD_g Triticum aestivum TRAES3BF094200030CFD_g I 0.744
TRAES3BF107400040CFD_g Triticum aestivum TRAES3BF107400040CFD_g I 0.744
Traes_3DL_D82CA7827 Triticum aestivum Traes_3DL_D82CA7827 I 0.744
Pavir.Ea03527 Panicum virgatum Pavir.Ea03527 I 0.744
Pavir.J23046 Panicum virgatum Pavir.J23046 I 0.744
SapurV1A.0152s0010 Salix purpurea SapurV1A.0152s0010 I 0.744
SapurV1A.0629s0180 Salix purpurea SapurV1A.0629s0180 I 0.744
mgf000016m Mimulus guttatus mgf000016m I 0.740
POPTR_0008s18130 Populus trichocarpa POPTR_0008s18130 I 0.738
SapurV1A.0206s0280 Salix purpurea SapurV1A.0206s0280 I 0.738
MDP0000305167 Malus domestica MDP0000305167 I 0.723
MDP0000307383 Malus domestica MDP0000307383 I 0.723
VIT_17s0000g10100 Vitis vinifera VIT_17s0000g10100 I 0.721
Ciclev10031052m.g Citrus clementina Ciclev10031052m.g I 0.721
orange1.1g007940m.g Citrus sinensis orange1.1g007940m.g I 0.721
BRADI2G58020 Brachypodium distachyon BRADI2G58020 I 0.720
mgf004388m Mimulus guttatus mgf004388m I 0.708
PGSC0003DMG400011980 Solanum tuberosum PGSC0003DMG400011980 I 0.696
Ca_11309 Cicer arietinum Ca_11309 I 0.696
PDK_20s1379531g004 Phoenix dactylifera PDK_20s1379531g004 I 0.681
orange1.1g027234m.g Citrus sinensis orange1.1g027234m.g I 0.669
29929.m004752 Ricinus communis 29929.m004752 I 0.666
Eucgr.H04693 Eucalyptus grandis Eucgr.H04693 I 0.666
Lus10006446.g Linum usitatissimum Lus10006446.g I 0.666
Lus10011389.g Linum usitatissimum Lus10011389.g I 0.666