SU7_0942 (Saccharomyces arboricola)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 SU7_0942 T342920_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.994 0.994
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.994 0.994
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.994 0.994
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.802 0.802
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.802 0.802
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.802 0.802
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.802 0.802
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.802 0.802
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.802 0.802
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.802 0.802
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.802 0.802
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.802 0.802
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJS43965 TBP 64 146
EJS43965 TBP 154 237

Links

Other TBP family TFs
Other Saccharomyces arboricola TFs

781 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HPODL_00106 Ogataea parapolymorpha HPODL_00106 I
Thaps22570 Thalassiosira pseudonana Thaps22570 I
Phatr3_J49594 Phaeodactylum tricornutum Phatr3_J49594 I
Thaps264346 Thalassiosira pseudonana Thaps264346 I
Thaps8654 Thalassiosira pseudonana Thaps8654 I
estExt_fgenesh2_pg.C_420088 Fragilariopsis cylindrus estExt_fgenesh2_pg.C_420088 I
CAOG_06646 Capsaspora owczarzaki CAOG_06646 I
Thaps264036 Thalassiosira pseudonana Thaps264036 N
Thaps12116 Thalassiosira pseudonana Thaps12116 N
Thaps22135 Thalassiosira pseudonana Thaps22135 N
gw1.21.273.1 Fragilariopsis cylindrus gw1.21.273.1 N
Thaps22932 Thalassiosira pseudonana Thaps22932 N
Thaps23803 Thalassiosira pseudonana Thaps23803 N
Thaps23848 Thalassiosira pseudonana Thaps23848 N
Thaps25112 Thalassiosira pseudonana Thaps25112 N
e_gw1.2.349.1 Fragilariopsis cylindrus e_gw1.2.349.1 N
Thaps264072 Thalassiosira pseudonana Thaps264072 N
fgenesh2_pg.2_#_1024 Fragilariopsis cylindrus fgenesh2_pg.2_#_1024 N
Thaps264590 Thalassiosira pseudonana Thaps264590 N
Thaps269233 Thalassiosira pseudonana Thaps269233 N
Thaps8215 Thalassiosira pseudonana Thaps8215 N
e_gw1.21.303.1 Fragilariopsis cylindrus e_gw1.21.303.1 N
Phatr3_J45206 Phaeodactylum tricornutum Phatr3_J45206 N
Phatr3_EG02327 Phaeodactylum tricornutum Phatr3_EG02327 N
Phatr3_EG02471 Phaeodactylum tricornutum Phatr3_EG02471 N
Phatr3_J31764 Phaeodactylum tricornutum Phatr3_J31764 N
Phatr3_J42552 Phaeodactylum tricornutum Phatr3_J42552 N
Phatr3_J43364 Phaeodactylum tricornutum Phatr3_J43364 N
Phatr3_J43413 Phaeodactylum tricornutum Phatr3_J43413 N
HSF1 Phaeodactylum tricornutum Phatr3_J44099 N
Phatr3_J44586 Phaeodactylum tricornutum Phatr3_J44586 N
Phatr3_J44917 Phaeodactylum tricornutum Phatr3_J44917 N
Thaps12066 Thalassiosira pseudonana Thaps12066 N
Phatr3_J45392 Phaeodactylum tricornutum Phatr3_J45392 N
Phatr3_J45393 Phaeodactylum tricornutum Phatr3_J45393 N
Phatr3_J45926 Phaeodactylum tricornutum Phatr3_J45926 N
Phatr3_J47952 Phaeodactylum tricornutum Phatr3_J47952 N
Phatr3_J48394 Phaeodactylum tricornutum Phatr3_J48394 N
Phatr3_J50481 Phaeodactylum tricornutum Phatr3_J50481 N
Phatr3_Jdraft1650 Phaeodactylum tricornutum Phatr3_Jdraft1650 N
Thaps11244 Thalassiosira pseudonana Thaps11244 N