CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCUD_0000710001
(
Schistosoma curassoni
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
SCUD_0000710001
T343596_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SCUD_0000710001-mRNA-1
TBP
34
116
KPVIHNMVSTVDLGCPIELRKLVLHVRSAEYNPRRFPGVVMRLREPRVTCLVFGTGRMVCTGARSESDANLGSRKCARILQRL
SCUD_0000710001-mRNA-1
TBP
124
207
NFTIQNMVGLADLRFPIRLEGVQLANEQMTQYEPEIFPALIYRIIKPRLVMLIFVNGKIVMTGAKSREHLYEALNNVYPILYNY
Links
Other
TBP
family TFs
Other
Schistosoma curassoni
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava29542.valid.m1
Manihot esculenta
cassava29542.valid.m1
N
PK15839.1
Cannabis sativa
PK15839.1
N
Thhalv10028570m.g
Eutrema salsugineum
Thhalv10028570m.g
N
SapurV1A.0053s0470
Salix purpurea
SapurV1A.0053s0470
N
orange1.1g010066m.g
Citrus sinensis
orange1.1g010066m.g
N
Lus10014877.g
Linum usitatissimum
Lus10014877.g
N
Gorai.004G084100
Gossypium raimondii
Gorai.004G084100
N
Ciclev10019732m.g
Citrus clementina
Ciclev10019732m.g
N
Carubv10003638m.g
Capsella rubella
Carubv10003638m.g
N
Cagra.2552s0028
Capsella grandiflora
Cagra.2552s0028
N
Bostr.2983s0143
Boechera stricta
Bostr.2983s0143
N
Aquca_026_00063
Aquilegia coerulea
Aquca_026_00063
N
mgf009605m
Mimulus guttatus
mgf009605m
N
mgf007983m
Mimulus guttatus
mgf007983m
N
Cucsa.033690
Cucumis sativus
Cucsa.033690
N
AMTR_s00025p00060270
Amborella trichopoda
AMTR_s00025p00060270
N
29703.m001536
Ricinus communis
29703.m001536
N
Pm019894
Prunus mume
Pm019894
N
Cla005647
Citrullus lanatus
Cla005647
N
Ca_25867
Cicer arietinum
Ca_25867
N
VIT_07s0104g00720
Vitis vinifera
VIT_07s0104g00720
N
TCM_004475
Theobroma cacao
TCM_004475
N
PRUPE_ppa004198mg
Prunus persica
PRUPE_ppa004198mg
N
POPTR_0014s13360
Populus trichocarpa
POPTR_0014s13360
N
MTR_5g068860
Medicago truncatula
MTR_5g068860
N
GLYMA02G38800
Glycine max
GLYMA02G38800
N
fgenesh2_kg.6__3397__AT4G02990.1
Arabidopsis lyrata
fgenesh2_kg.6__3397__AT4G02990.1
N
Bra036228
Brassica rapa
Bra036228
N
Bo9g006180
Brassica oleracea
Bo9g006180
N
MTERF4
Arabidopsis thaliana
AT4G02990
N