cassava29542.valid.m1 (Manihot esculenta)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 cassava29542.valid.m1 T264347_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava29542.valid.m1 mTERF 81 169
cassava29542.valid.m1 mTERF 171 479

Links

Other mTERF family TFs
Other Manihot esculenta TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0014s13360 Populus trichocarpa POPTR_0014s13360 N 0.885
SapurV1A.0053s0470 Salix purpurea SapurV1A.0053s0470 N 0.875
29703.m001536 Ricinus communis 29703.m001536 N 0.872
VIT_07s0104g00720 Vitis vinifera VIT_07s0104g00720 N 0.854
TCM_004475 Theobroma cacao TCM_004475 N 0.848
Gorai.004G084100 Gossypium raimondii Gorai.004G084100 N 0.846
Pm019894 Prunus mume Pm019894 N 0.840
PRUPE_ppa004198mg Prunus persica PRUPE_ppa004198mg N 0.835
Ciclev10019732m.g Citrus clementina Ciclev10019732m.g N 0.827
orange1.1g010066m.g Citrus sinensis orange1.1g010066m.g N 0.827
PK15839.1 Cannabis sativa PK15839.1 N 0.822
GLYMA02G38800 Glycine max GLYMA02G38800 N 0.815
Aquca_026_00063 Aquilegia coerulea Aquca_026_00063 N 0.813
mgf009605m Mimulus guttatus mgf009605m N 0.797
mgf007983m Mimulus guttatus mgf007983m N 0.797
Lus10014877.g Linum usitatissimum Lus10014877.g N 0.796
Carubv10003638m.g Capsella rubella Carubv10003638m.g N 0.789
MTERF4 Arabidopsis thaliana AT4G02990 N 0.789
fgenesh2_kg.6__3397__AT4G02990.1 Arabidopsis lyrata fgenesh2_kg.6__3397__AT4G02990.1 N 0.789
Cagra.2552s0028 Capsella grandiflora Cagra.2552s0028 N 0.789
Eucgr.A01358 Eucalyptus grandis Eucgr.A01358 N 0.787
Bostr.2983s0143 Boechera stricta Bostr.2983s0143 N 0.787
MTR_5g068860 Medicago truncatula MTR_5g068860 N 0.785
Ca_25867 Cicer arietinum Ca_25867 N 0.784
Bo9g006180 Brassica oleracea Bo9g006180 N 0.781
Cla005647 Citrullus lanatus Cla005647 N 0.781
Thhalv10028570m.g Eutrema salsugineum Thhalv10028570m.g N 0.778
PGSC0003DMG400002856 Solanum tuberosum PGSC0003DMG400002856 N 0.772
Bra036228 Brassica rapa Bra036228 N 0.771
Solyc04g005630.2 Solanum lycopersicum Solyc04g005630.2 N 0.770
Cucsa.033690 Cucumis sativus Cucsa.033690 N 0.766
gene27730-v1.0-hybrid Fragaria vesca gene27730-v1.0-hybrid N 0.763
AMTR_s00025p00060270 Amborella trichopoda AMTR_s00025p00060270 N 0.753