CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.033690
(
Cucumis sativus
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cucsa.033690
T264374_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.033690.1
mTERF
85
170
SIGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLILGCSVKKNMIP
Cucsa.033690.1
mTERF
172
480
LDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVTRREIGGVLTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKRPHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGIDLEANLQTQRNLLKSLIELDNDNFGTIIEKMPQVVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMKHSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFM
Links
Other
mTERF
family TFs
Other
Cucumis sativus
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla005647
Citrullus lanatus
Cla005647
N
0.935
PRUPE_ppa004198mg
Prunus persica
PRUPE_ppa004198mg
N
0.796
Pm019894
Prunus mume
Pm019894
N
0.796
Gorai.004G084100
Gossypium raimondii
Gorai.004G084100
N
0.795
POPTR_0014s13360
Populus trichocarpa
POPTR_0014s13360
N
0.784
orange1.1g010066m.g
Citrus sinensis
orange1.1g010066m.g
N
0.781
Ciclev10019732m.g
Citrus clementina
Ciclev10019732m.g
N
0.781
TCM_004475
Theobroma cacao
TCM_004475
N
0.778
PK15839.1
Cannabis sativa
PK15839.1
N
0.776
VIT_07s0104g00720
Vitis vinifera
VIT_07s0104g00720
N
0.772
SapurV1A.0053s0470
Salix purpurea
SapurV1A.0053s0470
N
0.771
Lus10014877.g
Linum usitatissimum
Lus10014877.g
N
0.770
cassava29542.valid.m1
Manihot esculenta
cassava29542.valid.m1
N
0.766
Bostr.2983s0143
Boechera stricta
Bostr.2983s0143
N
0.761
MTERF4
Arabidopsis thaliana
AT4G02990
N
0.760
fgenesh2_kg.6__3397__AT4G02990.1
Arabidopsis lyrata
fgenesh2_kg.6__3397__AT4G02990.1
N
0.760
Carubv10003638m.g
Capsella rubella
Carubv10003638m.g
N
0.758
Cagra.2552s0028
Capsella grandiflora
Cagra.2552s0028
N
0.758
GLYMA02G38800
Glycine max
GLYMA02G38800
N
0.755
Eucgr.A01358
Eucalyptus grandis
Eucgr.A01358
N
0.753
Thhalv10028570m.g
Eutrema salsugineum
Thhalv10028570m.g
N
0.753
Aquca_026_00063
Aquilegia coerulea
Aquca_026_00063
N
0.749
MTR_5g068860
Medicago truncatula
MTR_5g068860
N
0.748
evm.TU.supercontig_9.127
Carica papaya
evm.TU.supercontig_9.127
N
0.737
Bo9g006180
Brassica oleracea
Bo9g006180
N
0.737
mgf009605m
Mimulus guttatus
mgf009605m
N
0.736
mgf007983m
Mimulus guttatus
mgf007983m
N
0.736
Bra036228
Brassica rapa
Bra036228
N
0.735
29703.m001536
Ricinus communis
29703.m001536
N
0.727
AMTR_s00025p00060270
Amborella trichopoda
AMTR_s00025p00060270
N
0.725
Ca_25867
Cicer arietinum
Ca_25867
N
0.721
PGSC0003DMG400002856
Solanum tuberosum
PGSC0003DMG400002856
N
0.713
Solyc04g005630.2
Solanum lycopersicum
Solyc04g005630.2
N
0.705
gene27730-v1.0-hybrid
Fragaria vesca
gene27730-v1.0-hybrid
N
0.701