PGSC0003DMG400026568 (Solanum tuberosum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 PGSC0003DMG400026568 T344272_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.905 0.471
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.908 0.534
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.903 0.471
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.886 0.466
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.884 0.413
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.866 0.397
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.871 0.505
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.871 0.505
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.852 0.388
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.852 0.421
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.853 0.456
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.852 0.421
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.853 0.456
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.853 0.456
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.852 0.437
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400068331 TCP 34 162
PGSC0003DMT400068332 TCP 34 184

Links

Other TCP family TFs
Other Solanum tuberosum TFs

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG17906 Caenorhabditis briggsae CBG17906 I
nhr-180 Caenorhabditis elegans WBGene00017961 I
nhr-125 Caenorhabditis elegans WBGene00003715 I
CRE27865 Caenorhabditis remanei CRE27865 N
nhr-228 Caenorhabditis elegans WBGene00020852 N
nhr-226 Caenorhabditis elegans WBGene00020850 N
nhr-225 Caenorhabditis elegans WBGene00020849 N
WBGene00020591 Caenorhabditis elegans WBGene00020591 N
nhr-156 Caenorhabditis elegans WBGene00015897 N
nhr-115 Caenorhabditis elegans WBGene00003705 N
nhr-95 Caenorhabditis elegans WBGene00003685 N
CBG01229 Caenorhabditis briggsae CBG01229 N
CRE19030 Caenorhabditis remanei CRE19030 N
CRE18696 Caenorhabditis remanei CRE18696 N
CRE09175 Caenorhabditis remanei CRE09175 N
CRE09174 Caenorhabditis remanei CRE09174 N
CRE09173 Caenorhabditis remanei CRE09173 N
CBN21664 Caenorhabditis brenneri CBN21664 N
CBN07208 Caenorhabditis brenneri CBN07208 N
CBG10448 Caenorhabditis briggsae CBG10448 N