chr4.LjB15O07.110.nc (Lotus japonicus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 chr4.LjB15O07.110.nc T345123_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.834 0.379
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.LjB15O07.110.nc TCP 123 271

Links

Other TCP family TFs
Other Lotus japonicus TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tox4.S Xenopus laevis XB-GENE-993810 I
HMEL005034 Heliconius melpomene HMEL005034 I
GB43084 Apis mellifera GB43084 I
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I
KGM_14572 Danaus plexippus KGM_14572 I
LotgiG109021 Lottia gigantea LotgiG109021 I
MCINX005468 Melitaea cinxia MCINX005468 I
NV10488 Nasonia vitripennis NV10488 I
TC012723 Tribolium castaneum TC012723 I
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I
BGIBMGA006848 Bombyx mori BGIBMGA006848 I
tox4a Gasterosteus aculeatus ENSGACG00000014107 I
CGI_10017717 Crassostrea gigas CGI_10017717 I
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I
tox4b Danio rerio ENSDARG00000100163 I
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N
ISCW015985 Ixodes scapularis ISCW015985 N
RO3G_05222 Rhizopus oryzae RO3G_05222 N
nRc.2.0.1.g36724 Romanomermis culicivorax nRc.2.0.1.g36724 N
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N
XP_002936155 Xenopus tropicalis XP_002936155 N
MDOA008605 Musca domestica MDOA008605 N
D917_02150 Trichinella nativa D917_02150 N
tox4b Oryzias latipes ENSORLG00000008779 N
EFV61455 Trichinella spiralis EFV61455 N
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N
tox2 Gasterosteus aculeatus ENSGACG00000006914 N
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N
tox2 Oryzias latipes ENSORLG00000004818 N
HelroG145107 Helobdella robusta HelroG145107 N
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N
tox4b Takifugu rubripes ENSTRUG00000002594 N
tox2 Takifugu rubripes ENSTRUG00000013848 N
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N