Bo5g131870 (Brassica oleracea)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 Bo5g131870 T350734_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.767 0.767
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.767 0.767
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g131870.1 WRC 82 124

Links

Other WRC family TFs
Other Brassica oleracea TFs

442 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC050 Arabidopsis thaliana AT3G10480 D 0.000
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I 0.000
Cagra.9217s0020 Capsella grandiflora Cagra.9217s0020 I 0.000
Cagra.0834s0028 Capsella grandiflora Cagra.0834s0028 I 0.000
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I 0.000
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I 0.000
mgf004743m Mimulus guttatus mgf004743m I 0.000
mgf000623m Mimulus guttatus mgf000623m I 0.000
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.000
cassava22912.valid.m1 Manihot esculenta cassava22912.valid.m1 I 0.000
Pm017547 Prunus mume Pm017547 I 0.000
Cla020838 Citrullus lanatus Cla020838 I 0.000
Ca_08371 Cicer arietinum Ca_08371 I 0.000
VIT_13s0019g05240 Vitis vinifera VIT_13s0019g05240 I 0.000
VIT_13s0019g05230 Vitis vinifera VIT_13s0019g05230 I 0.000
TRIUR3_33524 Triticum urartu TRIUR3_33524 I 0.000
Traes_7DS_9FBF54244 Triticum aestivum Traes_7DS_9FBF54244 I 0.000
Traes_7BL_FB5FAC1E8 Triticum aestivum Traes_7BL_FB5FAC1E8 I 0.000
Traes_6AL_8BA1FF8B2 Triticum aestivum Traes_6AL_8BA1FF8B2 I 0.000
TCM_043357 Theobroma cacao TCM_043357 I 0.000
Solyc05g055480.2 Solanum lycopersicum Solyc05g055480.2 I 0.000
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I 0.000
Si016620m.g Setaria italica Si016620m.g I 0.000
Si013361m.g Setaria italica Si013361m.g I 0.000
Lus10038670.g Linum usitatissimum Lus10038670.g I 0.000
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.000
PK06477.1 Cannabis sativa PK06477.1 I 0.000
Thhalv10020745m.g Eutrema salsugineum Thhalv10020745m.g I 0.000
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.000
Pavir.Fb02407 Panicum virgatum Pavir.Fb02407 I 0.000
Pavir.Fa00048 Panicum virgatum Pavir.Fa00048 I 0.000
Pavir.Ab03009 Panicum virgatum Pavir.Ab03009 I 0.000
Pavir.Aa00085 Panicum virgatum Pavir.Aa00085 I 0.000
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I 0.000
MDP0000437676 Malus domestica MDP0000437676 I 0.000
MDP0000258167 Malus domestica MDP0000258167 I 0.000
Sb07g023900 Sorghum bicolor Sb07g023900 I 0.000
Lus10037939.g Linum usitatissimum Lus10037939.g I 0.000
Lus10023537.g Linum usitatissimum Lus10023537.g I 0.000
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I 0.000
Gorai.011G234200 Gossypium raimondii Gorai.011G234200 I 0.000
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I 0.000
gene23561-v1.0-hybrid Fragaria vesca gene23561-v1.0-hybrid I 0.000
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I 0.000
Carubv10013694m.g Capsella rubella Carubv10013694m.g I 0.000
Carubv10013564m.g Capsella rubella Carubv10013564m.g I 0.000
Carubv10003768m.g Capsella rubella Carubv10003768m.g I 0.000
Bra029844 Brassica rapa Bra029844 I 0.000
LPERR08G20450 Leersia perrieri LPERR08G20450 I 0.000
GRMZM2G113950 Zea mays GRMZM2G113950 I 0.000
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.000
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.000
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I 0.000
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I 0.000
F775_27564 Aegilops tauschii F775_27564 I 0.000
BRADI3G56080 Brachypodium distachyon BRADI3G56080 I 0.000
BRADI3G12470 Brachypodium distachyon BRADI3G12470 I 0.000
Bra034119 Brassica rapa Bra034119 I 0.000
Bra034118 Brassica rapa Bra034118 I 0.000
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.000
Bra001366 Brassica rapa Bra001366 I 0.000
Bra001365 Brassica rapa Bra001365 I 0.000
Bo5g137360 Brassica oleracea Bo5g137360 I 0.000
Bo3g062710 Brassica oleracea Bo3g062710 I 0.000
Bo3g062700 Brassica oleracea Bo3g062700 I 0.000
Bo1g143850 Brassica oleracea Bo1g143850 I 0.000
Bo1g143840 Brassica oleracea Bo1g143840 I 0.000
BGIOSGA026481 Oryza indica BGIOSGA026481 I 0.000
BGIOSGA009316 Oryza indica BGIOSGA009316 I 0.000
ANAC052 Arabidopsis thaliana AT3G10490 I 0.000
OPUNC02G34910 Oryza punctata OPUNC02G34910 I 0.000
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.000
PGSC0003DMG402023373 Solanum tuberosum PGSC0003DMG402023373 I 0.000
PGSC0003DMG401023373 Solanum tuberosum PGSC0003DMG401023373 I 0.000
OS08G0562200 Oryza sativa OS08G0562200 I 0.000
OS02G0822400 Oryza sativa OS02G0822400 I 0.000
ORUFI08G26250 Oryza rufipogon ORUFI08G26250 I 0.000
ORUFI02G39260 Oryza rufipogon ORUFI02G39260 I 0.000
ORGLA08G0191600 Oryza glaberrima ORGLA08G0191600 I 0.000
ORGLA02G0329400 Oryza glaberrima ORGLA02G0329400 I 0.000
OPUNC08G21700 Oryza punctata OPUNC08G21700 I 0.000
Sb04g037720 Sorghum bicolor Sb04g037720 I 0.000
ONIVA08G26810 Oryza nivara ONIVA08G26810 I 0.000
ONIVA02G40500 Oryza nivara ONIVA02G40500 I 0.000
OMERI08G18580 Oryza meridionalis OMERI08G18580 I 0.000
OLONG_023179 Oryza longistaminata OLONG_023179 I 0.000
OGLUM08G25240 Oryza glumaepatula OGLUM08G25240 I 0.000
OGLUM02G38880 Oryza glumaepatula OGLUM02G38880 I 0.000
OBART08G23760 Oryza barthii OBART08G23760 I 0.000
OBART02G37700 Oryza barthii OBART02G37700 I 0.000
OB08G30590 Oryza brachyantha OB08G30590 I 0.000
OB02G44540 Oryza brachyantha OB02G44540 I 0.000