MTR_1g054175 (Medicago truncatula)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 MTR_1g054175 T350962_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42040
M01088_2.00 		Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN		 PBM
Sullivan et al.(2014)
pTH7503 		0.860 0.860
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH41715 WRC 129 171
KEH41716 WRC 184 226

Links

Other WRC family TFs
Other Medicago truncatula TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G42040 Arabidopsis thaliana AT2G42040 D 0.860
Aquca_014_00855 Aquilegia coerulea Aquca_014_00855 I 0.837
Bostr.25993s0574 Boechera stricta Bostr.25993s0574 I 0.837
mgf007626m Mimulus guttatus mgf007626m I 0.791
Cucsa.242590 Cucumis sativus Cucsa.242590 I 0.953
cassava36464.valid.m1 Manihot esculenta cassava36464.valid.m1 I 1.000
cassava36463.valid.m1 Manihot esculenta cassava36463.valid.m1 I 1.000
cassava31648.valid.m1 Manihot esculenta cassava31648.valid.m1 I 1.000
29613.m000379 Ricinus communis 29613.m000379 I 1.000
29613.m000377 Ricinus communis 29613.m000377 I 0.977
Pm025936 Prunus mume Pm025936 I 1.000
Ca_07320 Cicer arietinum Ca_07320 I 1.000
VIT_08s0007g06690 Vitis vinifera VIT_08s0007g06690 I 0.907
VIT_08s0007g06640 Vitis vinifera VIT_08s0007g06640 I 0.977
TCM_024932 Theobroma cacao TCM_024932 I 1.000
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I 0.907
Sb10g006810 Sorghum bicolor Sb10g006810 I 0.791
PRUPE_ppa016277mg Prunus persica PRUPE_ppa016277mg I 1.000
POPTR_0016s05850 Populus trichocarpa POPTR_0016s05850 I 0.953
POPTR_0016s05840 Populus trichocarpa POPTR_0016s05840 I 0.977
POPTR_0006s20790 Populus trichocarpa POPTR_0006s20790 I 0.977
POPTR_0006s20770 Populus trichocarpa POPTR_0006s20770 I 0.953
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I 0.907
orange1.1g019760m.g Citrus sinensis orange1.1g019760m.g I 0.977
PDK_20s1436981g002 Phoenix dactylifera PDK_20s1436981g002 I 0.907
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I 0.953
PK26699.1 Cannabis sativa PK26699.1 I 0.977
Thhalv10017052m.g Eutrema salsugineum Thhalv10017052m.g I 0.860
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I 0.930
SapurV1A.0854s0100 Salix purpurea SapurV1A.0854s0100 I 0.930
SapurV1A.0854s0090 Salix purpurea SapurV1A.0854s0090 I 0.977
SapurV1A.0251s0230 Salix purpurea SapurV1A.0251s0230 I 0.953
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I 0.930
Pavir.J25248 Panicum virgatum Pavir.J25248 I 0.791
Pavir.J23833 Panicum virgatum Pavir.J23833 I 0.791
OS06G0207600 Oryza sativa OS06G0207600 I 0.833
MDP0000154434 Malus domestica MDP0000154434 I 0.977
MDP0000121493 Malus domestica MDP0000121493 I 0.953
Gorai.012G100300 Gossypium raimondii Gorai.012G100300 I 1.000
Gorai.002G156300 Gossypium raimondii Gorai.002G156300 I 0.977
gene00456-v1.0-hybrid Fragaria vesca gene00456-v1.0-hybrid I 0.953
evm.TU.supercontig_85.54 Carica papaya evm.TU.supercontig_85.54 I 1.000
Eucgr.A02456 Eucalyptus grandis Eucgr.A02456 I 1.000
Ciclev10012160m.g Citrus clementina Ciclev10012160m.g I 0.977
Carubv10023878m.g Capsella rubella Carubv10023878m.g I 0.837
Cagra.13389s0020 Capsella grandiflora Cagra.13389s0020 I 0.837
fgenesh2_kg.4__2350__AT2G42040.1 Arabidopsis lyrata fgenesh2_kg.4__2350__AT2G42040.1 I 0.860
OS02G0773600 Oryza sativa OS02G0773600 I 0.837
GSMUA_Achr3G20210_001 Musa acuminata GSMUA_Achr3G20210_001 I 0.930
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I 0.953
GSMUA_Achr10G29530_001 Musa acuminata GSMUA_Achr10G29530_001 I 0.977
GRMZM2G165991 Zea mays GRMZM2G165991 I 0.756
GRMZM2G033915 Zea mays GRMZM2G033915 I 0.767
GLYMA19G33070 Glycine max GLYMA19G33070 I 1.000
GLYMA09G16841 Glycine max GLYMA09G16841 I 1.000
GLYMA03G30170 Glycine max GLYMA03G30170 I 1.000
GLYMA02G28962 Glycine max GLYMA02G28962 I 0.977
GSMUA_Achr7G18600_001 Musa acuminata GSMUA_Achr7G18600_001 I 0.977
F775_01928 Aegilops tauschii F775_01928 I 0.833
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I 0.791
Bra016897 Brassica rapa Bra016897 I 0.814
Bra004667 Brassica rapa Bra004667 I 0.791
Bra000251 Brassica rapa Bra000251 I 0.837
Bo4g191280 Brassica oleracea Bo4g191280 I 0.814
Bo4g014690 Brassica oleracea Bo4g014690 I 0.814
Bo3g035920 Brassica oleracea Bo3g035920 I 0.837
BGIOSGA022518 Oryza indica BGIOSGA022518 I 0.833
BGIOSGA005516 Oryza indica BGIOSGA005516 I 0.837
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I 0.833
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I 0.833
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I 0.837
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I 0.833
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I 0.837
OPUNC06G06450 Oryza punctata OPUNC06G06450 I 0.791
OPUNC02G31650 Oryza punctata OPUNC02G31650 I 0.837
ONIVA06G08110 Oryza nivara ONIVA06G08110 I 0.833
ONIVA02G36360 Oryza nivara ONIVA02G36360 I 0.837
OMERI06G07980 Oryza meridionalis OMERI06G07980 I 0.791
OMERI02G32570 Oryza meridionalis OMERI02G32570 I 0.837
GSMUA_Achr9G15730_001 Musa acuminata GSMUA_Achr9G15730_001 I 1.000
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I 0.837
OBART06G06800 Oryza barthii OBART06G06800 I 0.837
OB06G16230 Oryza brachyantha OB06G16230 I 0.814
MTR_7g093360 Medicago truncatula MTR_7g093360 I 1.000
MTR_7g093350 Medicago truncatula MTR_7g093350 I 1.000
MLOC_17575 Hordeum vulgare MLOC_17575 I 0.791
LPERR06G06210 Leersia perrieri LPERR06G06210 I 0.791
LPERR02G28190 Leersia perrieri LPERR02G28190 I 0.814
GRMZM2G134552 Zea mays GRMZM2G134552 N 0.721