Al_scaffold_0004_2305 (Arabidopsis lyrata)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Al_scaffold_0004_2305 T351849_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.834 0.780
WRKY53
M01090_2.00 		Arabidopsis thaliana
RGTCAACNN
NNGTTGACY		 PBM
Sullivan et al.(2014)
pTH8245 		0.819 0.576
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.815 0.576
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0004_2305 WRKY 152 212

Links

Other WRKY family TFs
Other Arabidopsis lyrata TFs

409 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC038 Arabidopsis thaliana AT2G24430 D
anac058 Arabidopsis thaliana AT3G18400 D
NAC098 Arabidopsis thaliana AT5G53950 D
anac058 Arabidopsis lyrata Al_scaffold_0003_1942 I
CUC2 Arabidopsis lyrata Al_scaffold_0008_1815 I
AMTR_s00010p00266320 Amborella trichopoda AMTR_s00010p00266320 I
AMTR_s00025p00174590 Amborella trichopoda AMTR_s00025p00174590 I
AMTR_s00058p00136280 Amborella trichopoda AMTR_s00058p00136280 I
AMTR_s00079p00099620 Amborella trichopoda AMTR_s00079p00099620 I
BGIOSGA013151 Oryza indica BGIOSGA013151 I
BGIOSGA022861 Oryza indica BGIOSGA022861 I
BGIOSGA029508 Oryza indica BGIOSGA029508 I
Bo01320s020 Brassica oleracea Bo01320s020 I
Bo1g117610 Brassica oleracea Bo1g117610 I
Bo2g043280 Brassica oleracea Bo2g043280 I
Bo3g071500 Brassica oleracea Bo3g071500 I
Bo4g154590 Brassica oleracea Bo4g154590 I
Bo8g099810 Brassica oleracea Bo8g099810 I
Bo9g113820 Brassica oleracea Bo9g113820 I
Bra001705 Brassica rapa Bra001705 I
Bra003023 Brassica rapa Bra003023 I
Bra007855 Brassica rapa Bra007855 I
Bra022319 Brassica rapa Bra022319 I
Bra022685 Brassica rapa Bra022685 I
Bra032095 Brassica rapa Bra032095 I
Bra037585 Brassica rapa Bra037585 I
BRADI1G14467 Brachypodium distachyon BRADI1G14467 I
BRADI4G34157 Brachypodium distachyon BRADI4G34157 I
F775_05949 Aegilops tauschii F775_05949 I
F775_52293 Aegilops tauschii F775_52293 I
ANAC039 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4000352 I
GLYMA04G08320 Glycine max GLYMA04G08320 I
GLYMA06G08440 Glycine max GLYMA06G08440 I
GLYMA06G35660 Glycine max GLYMA06G35660 I
GLYMA07G10240 Glycine max GLYMA07G10240 I
GLYMA09G37050 Glycine max GLYMA09G37050 I
GLYMA12G26190 Glycine max GLYMA12G26190 I
GLYMA14G20276 Glycine max GLYMA14G20276 I
GRMZM2G386163 Zea mays GRMZM2G386163 I
GSMUA_Achr10G05070_001 Musa acuminata GSMUA_Achr10G05070_001 I
GSMUA_Achr10G19900_001 Musa acuminata GSMUA_Achr10G19900_001 I
GSMUA_Achr10G22350_001 Musa acuminata GSMUA_Achr10G22350_001 I
GSMUA_Achr7G19680_001 Musa acuminata GSMUA_Achr7G19680_001 I
GSMUA_Achr8G18420_001 Musa acuminata GSMUA_Achr8G18420_001 I
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I
GSMUA_Achr8G24680_001 Musa acuminata GSMUA_Achr8G24680_001 I
LPERR03G21900 Leersia perrieri LPERR03G21900 I
LPERR06G12840 Leersia perrieri LPERR06G12840 I
LPERR09G11330 Leersia perrieri LPERR09G11330 I
MLOC_68185 Hordeum vulgare MLOC_68185 I
MLOC_68284 Hordeum vulgare MLOC_68284 I
MTR_1g008740 Medicago truncatula MTR_1g008740 I
MTR_2g078700 Medicago truncatula MTR_2g078700 I
MTR_3g109340 Medicago truncatula MTR_3g109340 I
MTR_3g435150 Medicago truncatula MTR_3g435150 I
MTR_4g108760 Medicago truncatula MTR_4g108760 I
MTR_6g012670 Medicago truncatula MTR_6g012670 I
OB03G34470 Oryza brachyantha OB03G34470 I
OB06G22100 Oryza brachyantha OB06G22100 I
OBART03G26480 Oryza barthii OBART03G26480 I
OBART06G13940 Oryza barthii OBART06G13940 I
OBART09G15220 Oryza barthii OBART09G15220 I
OGLUM03G27330 Oryza glumaepatula OGLUM03G27330 I
OGLUM06G14810 Oryza glumaepatula OGLUM06G14810 I
OGLUM09G15820 Oryza glumaepatula OGLUM09G15820 I
OLONG_009674 Oryza longistaminata OLONG_009674 I
OLONG_019251 Oryza longistaminata OLONG_019251 I
OMERI03G23890 Oryza meridionalis OMERI03G23890 I
OMERI07G04410 Oryza meridionalis OMERI07G04410 I
ONIVA03G27500 Oryza nivara ONIVA03G27500 I
ONIVA03G33370 Oryza nivara ONIVA03G33370 I
ONIVA09G15800 Oryza nivara ONIVA09G15800 I
OPUNC03G24220 Oryza punctata OPUNC03G24220 I
OPUNC06G13130 Oryza punctata OPUNC06G13130 I
OPUNC09G13640 Oryza punctata OPUNC09G13640 I
ORGLA03G0246300 Oryza glaberrima ORGLA03G0246300 I
ORGLA06G0124600 Oryza glaberrima ORGLA06G0124600 I
ORGLA09G0117400 Oryza glaberrima ORGLA09G0117400 I
ORUFI03G27440 Oryza rufipogon ORUFI03G27440 I
ORUFI06G14810 Oryza rufipogon ORUFI06G14810 I
ORUFI09G16430 Oryza rufipogon ORUFI09G16430 I
OS03G0624600 Oryza sativa OS03G0624600 I
OS06G0344900 Oryza sativa OS06G0344900 I
OS09G0497900 Oryza sativa OS09G0497900 I
PGSC0003DMG400005384 Solanum tuberosum PGSC0003DMG400005384 I
PGSC0003DMG400014845 Solanum tuberosum PGSC0003DMG400014845 I
PGSC0003DMG400019523 Solanum tuberosum PGSC0003DMG400019523 I
PGSC0003DMG400028779 Solanum tuberosum PGSC0003DMG400028779 I
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I
PGSC0003DMG400033047 Solanum tuberosum PGSC0003DMG400033047 I
POPTR_0001s40680 Populus trichocarpa POPTR_0001s40680 I
POPTR_0006s29180 Populus trichocarpa POPTR_0006s29180 I
POPTR_0011s11600 Populus trichocarpa POPTR_0011s11600 I
POPTR_0012s01610 Populus trichocarpa POPTR_0012s01610 I
POPTR_0012s05280 Populus trichocarpa POPTR_0012s05280 I
POPTR_0015s02170 Populus trichocarpa POPTR_0015s02170 I
POPTR_0015s03700 Populus trichocarpa POPTR_0015s03700 I
POPTR_0018s03910 Populus trichocarpa POPTR_0018s03910 I
PRUPE_ppa007653mg Prunus persica PRUPE_ppa007653mg I
PRUPE_ppa007839mg Prunus persica PRUPE_ppa007839mg I
PRUPE_ppa025916mg Prunus persica PRUPE_ppa025916mg I
PRUPE_ppa026810mg Prunus persica PRUPE_ppa026810mg I
Sb01g014310 Sorghum bicolor Sb01g014310 I
Sb02g028870 Sorghum bicolor Sb02g028870 I
Si030187m.g Setaria italica Si030187m.g I
Si036535m.g Setaria italica Si036535m.g I
Solyc03g115850.2 Solanum lycopersicum Solyc03g115850.2 I
Solyc06g069100.1 Solanum lycopersicum Solyc06g069100.1 I
Solyc06g069710.2 Solanum lycopersicum Solyc06g069710.2 I
Solyc07g062840.2 Solanum lycopersicum Solyc07g062840.2 I
Solyc08g006020.2 Solanum lycopersicum Solyc08g006020.2 I
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I
Solyc12g036480.1 Solanum lycopersicum Solyc12g036480.1 I
TCM_012350 Theobroma cacao TCM_012350 I
TCM_014073 Theobroma cacao TCM_014073 I
TCM_031619 Theobroma cacao TCM_031619 I
TCM_036791 Theobroma cacao TCM_036791 I
Traes_4AL_B44DF4ACC Triticum aestivum Traes_4AL_B44DF4ACC I
Traes_4BS_373BDBA94 Triticum aestivum Traes_4BS_373BDBA94 I
Traes_5BL_657BF1497 Triticum aestivum Traes_5BL_657BF1497 I
TRIUR3_20591 Triticum urartu TRIUR3_20591 I
TRIUR3_27612 Triticum urartu TRIUR3_27612 I
ANAC039 Vitis vinifera VIT_04s0008g02710 I
anac058 Vitis vinifera VIT_17s0000g03660 I
VIT_19s0014g02200 Vitis vinifera VIT_19s0014g02200 I
Ca_11021 Cicer arietinum Ca_11021 I
Ca_22532 Cicer arietinum Ca_22532 I
Cla019391 Citrullus lanatus Cla019391 I
Cla022572 Citrullus lanatus Cla022572 I
Cla023717 Citrullus lanatus Cla023717 I
Pm005091 Prunus mume Pm005091 I
Pm011397 Prunus mume Pm011397 I
Pm015914 Prunus mume Pm015914 I
27950.m000105 Ricinus communis 27950.m000105 I
28226.m000851 Ricinus communis 28226.m000851 I
28649.m000212 Ricinus communis 28649.m000212 I
29974.m000235 Ricinus communis 29974.m000235 I
30138.m004055 Ricinus communis 30138.m004055 I
cassava17517.valid.m1 Manihot esculenta cassava17517.valid.m1 I
cassava1757.valid.m1 Manihot esculenta cassava1757.valid.m1 I
cassava1758.valid.m1 Manihot esculenta cassava1758.valid.m1 I
cassava18338.valid.m1 Manihot esculenta cassava18338.valid.m1 I
cassava2919.m1 Manihot esculenta cassava2919.m1 I
cassava361.valid.m1 Manihot esculenta cassava361.valid.m1 I
cassava44869.m1 Manihot esculenta cassava44869.m1 I
cassava46147.m1 Manihot esculenta cassava46147.m1 I
cassava9086.m1 Manihot esculenta cassava9086.m1 I
Cucsa.122890 Cucumis sativus Cucsa.122890 I
Cucsa.161510 Cucumis sativus Cucsa.161510 I
Cucsa.197830 Cucumis sativus Cucsa.197830 I
Cucsa.338700 Cucumis sativus Cucsa.338700 I
mgf003818m Mimulus guttatus mgf003818m I
mgf021065m Mimulus guttatus mgf021065m I
mgf021404m Mimulus guttatus mgf021404m I
mgf025158m Mimulus guttatus mgf025158m I
Aquca_002_00662 Aquilegia coerulea Aquca_002_00662 I
Aquca_018_00116 Aquilegia coerulea Aquca_018_00116 I
Bostr.19424s0822 Boechera stricta Bostr.19424s0822 I
Bostr.26675s0262 Boechera stricta Bostr.26675s0262 I
Bostr.26833s0880 Boechera stricta Bostr.26833s0880 I
Bostr.27895s0039 Boechera stricta Bostr.27895s0039 I
Cagra.1681s0009 Capsella grandiflora Cagra.1681s0009 I
Cagra.4091s0015 Capsella grandiflora Cagra.4091s0015 I
Cagra.4622s0005 Capsella grandiflora Cagra.4622s0005 I
Carubv10015990m.g Capsella rubella Carubv10015990m.g I
Carubv10025508m.g Capsella rubella Carubv10025508m.g I
Carubv10028330m.g Capsella rubella Carubv10028330m.g I
Ciclev10008619m.g Citrus clementina Ciclev10008619m.g I
Ciclev10008885m.g Citrus clementina Ciclev10008885m.g I
Ciclev10012093m.g Citrus clementina Ciclev10012093m.g I
Ciclev10020480m.g Citrus clementina Ciclev10020480m.g I
Ciclev10023578m.g Citrus clementina Ciclev10023578m.g I
Eucgr.B00724 Eucalyptus grandis Eucgr.B00724 I
Eucgr.C02105 Eucalyptus grandis Eucgr.C02105 I
Eucgr.K02225 Eucalyptus grandis Eucgr.K02225 I
evm.TU.supercontig_131.88 Carica papaya evm.TU.supercontig_131.88 I
evm.TU.supercontig_244.7 Carica papaya evm.TU.supercontig_244.7 I
evm.TU.supercontig_3.509 Carica papaya evm.TU.supercontig_3.509 I
gene04424-v1.0-hybrid Fragaria vesca gene04424-v1.0-hybrid I
gene08765-v1.0-hybrid Fragaria vesca gene08765-v1.0-hybrid I
gene25163-v1.0-hybrid Fragaria vesca gene25163-v1.0-hybrid I
gene26043-v1.0-hybrid Fragaria vesca gene26043-v1.0-hybrid I
Gorai.002G067300 Gossypium raimondii Gorai.002G067300 I
Gorai.006G060900 Gossypium raimondii Gorai.006G060900 I
Gorai.007G323900 Gossypium raimondii Gorai.007G323900 I
Gorai.010G124100 Gossypium raimondii Gorai.010G124100 I
Gorai.013G171300 Gossypium raimondii Gorai.013G171300 I
Lus10001648.g Linum usitatissimum Lus10001648.g I
Lus10005537.g Linum usitatissimum Lus10005537.g I
Lus10009029.g Linum usitatissimum Lus10009029.g I
Lus10009669.g Linum usitatissimum Lus10009669.g I
Lus10020165.g Linum usitatissimum Lus10020165.g I
Lus10021659.g Linum usitatissimum Lus10021659.g I
Lus10026966.g Linum usitatissimum Lus10026966.g I
Lus10027227.g Linum usitatissimum Lus10027227.g I
Lus10038937.g Linum usitatissimum Lus10038937.g I
Lus10041924.g Linum usitatissimum Lus10041924.g I
MDP0000135860 Malus domestica MDP0000135860 I
MDP0000153949 Malus domestica MDP0000153949 I
MDP0000232008 Malus domestica MDP0000232008 I
MDP0000246482 Malus domestica MDP0000246482 I
MDP0000310981 Malus domestica MDP0000310981 I
MDP0000690168 Malus domestica MDP0000690168 I
orange1.1g017827m.g Citrus sinensis orange1.1g017827m.g I
orange1.1g018950m.g Citrus sinensis orange1.1g018950m.g I
orange1.1g037591m.g Citrus sinensis orange1.1g037591m.g I
orange1.1g047710m.g Citrus sinensis orange1.1g047710m.g I
Pavir.Ia01262 Panicum virgatum Pavir.Ia01262 I
Pavir.Ib03976 Panicum virgatum Pavir.Ib03976 I
Pavir.J02772 Panicum virgatum Pavir.J02772 I
SapurV1A.0207s0120 Salix purpurea SapurV1A.0207s0120 I
SapurV1A.0263s0310 Salix purpurea SapurV1A.0263s0310 I
SapurV1A.0346s0160 Salix purpurea SapurV1A.0346s0160 I
SapurV1A.0377s0130 Salix purpurea SapurV1A.0377s0130 I
SapurV1A.0719s0060 Salix purpurea SapurV1A.0719s0060 I
SapurV1A.1146s0010 Salix purpurea SapurV1A.1146s0010 I
SapurV1A.1285s0100 Salix purpurea SapurV1A.1285s0100 I
SapurV1A.1325s0010 Salix purpurea SapurV1A.1325s0010 I
SapurV1A.1363s0020 Salix purpurea SapurV1A.1363s0020 I
SapurV1A.1381s0050 Salix purpurea SapurV1A.1381s0050 I
SapurV1A.1381s0060 Salix purpurea SapurV1A.1381s0060 I
SapurV1A.2059s0010 Salix purpurea SapurV1A.2059s0010 I
Thhalv10000520m.g Eutrema salsugineum Thhalv10000520m.g I
Thhalv10011708m.g Eutrema salsugineum Thhalv10011708m.g I
Thhalv10013863m.g Eutrema salsugineum Thhalv10013863m.g I
Thhalv10021200m.g Eutrema salsugineum Thhalv10021200m.g I
PK02366.1 Cannabis sativa PK02366.1 I
chr1.LjT35C22.60.nc Lotus japonicus chr1.LjT35C22.60.nc I
chr3.CM0282.730.nc Lotus japonicus chr3.CM0282.730.nc I
chr4.CM0087.800.nd Lotus japonicus chr4.CM0087.800.nd I
LjSGA_071377.1 Lotus japonicus LjSGA_071377.1 I
PDK_20s1323531g003 Phoenix dactylifera PDK_20s1323531g003 I
MTR_6g084430 Medicago truncatula MTR_6g084430 N
Ca_13012 Cicer arietinum Ca_13012 N