MTR_0002s1250 (Medicago truncatula)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 MTR_0002s1250 T353230_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.811 0.508
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.810 0.542
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.809 0.542
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH17744 WRKY 111 171

Links

Other WRKY family TFs
Other Medicago truncatula TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA9 Arabidopsis thaliana AT1G08320 D
evm.TU.supercontig_32.14 Carica papaya evm.TU.supercontig_32.14 I
TGA9 Vitis vinifera VIT_06s0080g00360 I
Eucgr.J00491 Eucalyptus grandis Eucgr.J00491 I
Eucgr.A02436 Eucalyptus grandis Eucgr.A02436 I
Carubv10011576m.g Capsella rubella Carubv10011576m.g I
Cagra.4395s0022 Capsella grandiflora Cagra.4395s0022 I
Bostr.25219s0112 Boechera stricta Bostr.25219s0112 I
Aquca_072_00138 Aquilegia coerulea Aquca_072_00138 I
Aquca_004_00127 Aquilegia coerulea Aquca_004_00127 I
mgf001395m Mimulus guttatus mgf001395m I
Cucsa.199800 Cucumis sativus Cucsa.199800 I
cassava13378.valid.m1 Manihot esculenta cassava13378.valid.m1 I
30055.m001550 Ricinus communis 30055.m001550 I
Pm029028 Prunus mume Pm029028 I
Pm001317 Prunus mume Pm001317 I
Cla008794 Citrullus lanatus Cla008794 I
Ca_07057 Cicer arietinum Ca_07057 I
PK08582.1 Cannabis sativa PK08582.1 I
Pavir.J04905 Panicum virgatum Pavir.J04905 I
AMTR_s00031p00017860 Amborella trichopoda AMTR_s00031p00017860 I
PK07387.1 Cannabis sativa PK07387.1 I
Thhalv10007490m.g Eutrema salsugineum Thhalv10007490m.g I
SapurV1A.0574s0080 Salix purpurea SapurV1A.0574s0080 I
SapurV1A.0374s0050 Salix purpurea SapurV1A.0374s0050 I
SapurV1A.0125s0260 Salix purpurea SapurV1A.0125s0260 I
SapurV1A.0009s1200 Salix purpurea SapurV1A.0009s1200 I
Pavir.J27823 Panicum virgatum Pavir.J27823 I
gene14220-v1.0-hybrid Fragaria vesca gene14220-v1.0-hybrid I
MDP0000301884 Malus domestica MDP0000301884 I
MDP0000250967 Malus domestica MDP0000250967 I
MDP0000145555 Malus domestica MDP0000145555 I
Lus10041475.g Linum usitatissimum Lus10041475.g I
Lus10034296.g Linum usitatissimum Lus10034296.g I
Gorai.006G111800 Gossypium raimondii Gorai.006G111800 I
gene21797-v1.0-hybrid Fragaria vesca gene21797-v1.0-hybrid I
GSMUA_Achr2G06770_001 Musa acuminata GSMUA_Achr2G06770_001 I
OPUNC02G06400 Oryza punctata OPUNC02G06400 I
ONIVA02G08860 Oryza nivara ONIVA02G08860 I
TCM_041421 Theobroma cacao TCM_041421 I
OLONG_010393 Oryza longistaminata OLONG_010393 I
OGLUM02G07240 Oryza glumaepatula OGLUM02G07240 I
OBART02G07230 Oryza barthii OBART02G07230 I
MTR_2g086420 Medicago truncatula MTR_2g086420 I
GSMUA_Achr9G27700_001 Musa acuminata GSMUA_Achr9G27700_001 I
OMERI02G08300 Oryza meridionalis OMERI02G08300 I
GLYMA12G09430 Glycine max GLYMA12G09430 I
GLYMA11G19026 Glycine max GLYMA11G19026 I
fgenesh1_pm.C_scaffold_1000665 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000665 I
Bra031622 Brassica rapa Bra031622 I
Bra018634 Brassica rapa Bra018634 I
Bo8g112540 Brassica oleracea Bo8g112540 I
Bo5g008940 Brassica oleracea Bo5g008940 I
BGIOSGA007726 Oryza indica BGIOSGA007726 I
OS02G0194900 Oryza sativa OS02G0194900 I
Solyc05g009660.2 Solanum lycopersicum Solyc05g009660.2 I
Sb04g006500 Sorghum bicolor Sb04g006500 I
Solyc06g074320.2 Solanum lycopersicum Solyc06g074320.2 I
Solyc10g080770.1 Solanum lycopersicum Solyc10g080770.1 I
PRUPE_ppa019842mg Prunus persica PRUPE_ppa019842mg I
PRUPE_ppa004537mg Prunus persica PRUPE_ppa004537mg I
POPTR_0009s16590 Populus trichocarpa POPTR_0009s16590 I
POPTR_0004s21360 Populus trichocarpa POPTR_0004s21360 I
ORGLA02G0067600 Oryza glaberrima ORGLA02G0067600 I
POPTR_0003s19410 Populus trichocarpa POPTR_0003s19410 I
PGSC0003DMG402023696 Solanum tuberosum PGSC0003DMG402023696 I
PGSC0003DMG400012962 Solanum tuberosum PGSC0003DMG400012962 I
Traes_4BS_B7A8F8CD8 Triticum aestivum Traes_4BS_B7A8F8CD8 N
Traes_4DS_0521C8ABF Triticum aestivum Traes_4DS_0521C8ABF N
F775_05299 Aegilops tauschii F775_05299 N
Traes_4AL_5E7F93445 Triticum aestivum Traes_4AL_5E7F93445 N
Ca_16486 Cicer arietinum Ca_16486 N
Pavir.Ea03760 Panicum virgatum Pavir.Ea03760 N
GSMUA_Achr10G10300_001 Musa acuminata GSMUA_Achr10G10300_001 N
GSMUA_Achr11G26170_001 Musa acuminata GSMUA_Achr11G26170_001 N
MLOC_17690 Hordeum vulgare MLOC_17690 N
Gorai.009G086200 Gossypium raimondii Gorai.009G086200 N
Cucsa.365420 Cucumis sativus Cucsa.365420 N