CERSUDRAFT_114695 (Ceriporiopsis subvermispora)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 CERSUDRAFT_114695 T363205_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCHCODRAFT_110010
M01418_2.00 		Schizophyllum commune
NWYCGGAABN
NVTTCCGRWN		 PBM
Lambert et al.(2019)
pTH9839 		0.598 0.943
aod-2
M02599_2.00 		Neurospora crassa
NNNNCGGRN
NYCCGNNNN		 PBM
Weirauch et al.(2014)
pTH8944 		0.571 0.829
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMD36782 Zinc cluster 55 91

Links

Other Zinc cluster family TFs
Other Ceriporiopsis subvermispora TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10025094m.g Citrus clementina Ciclev10025094m.g N
TCM_029115 Theobroma cacao TCM_029115 N
Cla015802 Citrullus lanatus Cla015802 N
Cucsa.360310 Cucumis sativus Cucsa.360310 N
Aquca_076_00106 Aquilegia coerulea Aquca_076_00106 N
Bostr.10273s0086 Boechera stricta Bostr.10273s0086 N
Cagra.0824s0115 Capsella grandiflora Cagra.0824s0115 N
Cagra.1013s0036 Capsella grandiflora Cagra.1013s0036 N
Carubv10012426m.g Capsella rubella Carubv10012426m.g N
Carubv10019876m.g Capsella rubella Carubv10019876m.g N
Si016649m.g Setaria italica Si016649m.g N
Gorai.011G058300 Gossypium raimondii Gorai.011G058300 N
Lus10015664.g Linum usitatissimum Lus10015664.g N
Lus10037678.g Linum usitatissimum Lus10037678.g N
orange1.1g006062m.g Citrus sinensis orange1.1g006062m.g N
Pavir.Aa00316 Panicum virgatum Pavir.Aa00316 N
Pavir.J06110 Panicum virgatum Pavir.J06110 N
Thhalv10018282m.g Eutrema salsugineum Thhalv10018282m.g N
PK02666.1 Cannabis sativa PK02666.1 N
LPERR02G28410 Leersia perrieri LPERR02G28410 N
BGIOSGA009134 Oryza indica BGIOSGA009134 N
Bo5g023810 Brassica oleracea Bo5g023810 N
Bo6g091360 Brassica oleracea Bo6g091360 N
Bra003871 Brassica rapa Bra003871 N
Bra016044 Brassica rapa Bra016044 N
Bra025973 Brassica rapa Bra025973 N
TRFL6 Arabidopsis lyrata fgenesh2_kg.2__1530__AT1G72650.2 N
GRMZM2G049194 Zea mays GRMZM2G049194 N
GSMUA_Achr5G24660_001 Musa acuminata GSMUA_Achr5G24660_001 N
TRFL6 Arabidopsis thaliana AT1G72650 N
OB02G41350 Oryza brachyantha OB02G41350 N
OBART02G34530 Oryza barthii OBART02G34530 N
OGLUM02G35670 Oryza glumaepatula OGLUM02G35670 N
ONIVA02G36570 Oryza nivara ONIVA02G36570 N
ORGLA02G0298600 Oryza glaberrima ORGLA02G0298600 N
ORUFI02G36040 Oryza rufipogon ORUFI02G36040 N
OS02G0776700 Oryza sativa OS02G0776700 N
Sb04g034770 Sorghum bicolor Sb04g034770 N