PV04_00230 (Capronia semiimmersa)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PV04_00230 T379738_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_01848
M01400_2.00 		Aspergillus nidulans
NVGCGBBWVN
NBWVVCGCBN		 PBM
Lambert et al.(2019)
pEX0279 		0.560 0.718
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIW72006 Zinc cluster 31 69

Links

Other Zinc cluster family TFs
Other Capronia semiimmersa TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000143276 Malus domestica MDP0000143276 I
TCM_037383 Theobroma cacao TCM_037383 I
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I
TRIUR3_09734 Triticum urartu TRIUR3_09734 I
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I
MDP0000887107 Malus domestica MDP0000887107 I
MDP0000261265 Malus domestica MDP0000261265 I
Pm005577 Prunus mume Pm005577 I
Pm027048 Prunus mume Pm027048 I
F775_19148 Aegilops tauschii F775_19148 I
MDP0000140609 Malus domestica MDP0000140609 I
cassava33302.m1 Manihot esculenta cassava33302.m1 I
cassava9944.m1 Manihot esculenta cassava9944.m1 I
MDP0000133817 Malus domestica MDP0000133817 I
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I
TCM_000535 Theobroma cacao TCM_000535 I
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I
GLYMA17G15270 Glycine max GLYMA17G15270 I
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I
TCM_015933 Theobroma cacao TCM_015933 I
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I
GLYMA05G04900 Glycine max GLYMA05G04900 I
F775_17212 Aegilops tauschii F775_17212 I
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N
PK08631.1 Cannabis sativa PK08631.1 N
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N
MDP0000124555 Malus domestica MDP0000124555 N
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N
MDP0000226215 Malus domestica MDP0000226215 N
MDP0000253904 Malus domestica MDP0000253904 N
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N
MDP0000931057 Malus domestica MDP0000931057 N
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N
orange1.1g028843m.g Citrus sinensis orange1.1g028843m.g N
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N
Cla012784 Citrullus lanatus Cla012784 N
GLYMA01G41610 Glycine max GLYMA01G41610 N
GLYMA11G03770 Glycine max GLYMA11G03770 N
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N
MTR_4g100720 Medicago truncatula MTR_4g100720 N
POPTR_0001s16970 Populus trichocarpa POPTR_0001s16970 N
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N
TCM_029126 Theobroma cacao TCM_029126 N
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N
Ca_12762 Cicer arietinum Ca_12762 N
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N
Pm013277 Prunus mume Pm013277 N
Pm023419 Prunus mume Pm023419 N
cassava2804.m1 Manihot esculenta cassava2804.m1 N
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N
Cucsa.340790 Cucumis sativus Cucsa.340790 N
mgf018735m Mimulus guttatus mgf018735m N
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N
Ciclev10022303m.g Citrus clementina Ciclev10022303m.g N
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N
evm.TU.supercontig_126.30 Carica papaya evm.TU.supercontig_126.30 N
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N