cassava33302.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava33302.m1 T284193_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.688 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava33302.m1 Myb 5 52
cassava33302.m1 Myb 58 103

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

259 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.858
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.854
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.844
Pm013277 Prunus mume Pm013277 N 0.844
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N 0.841
TCM_015933 Theobroma cacao TCM_015933 I 0.836
TCM_029126 Theobroma cacao TCM_029126 N 0.833
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.832
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.827
Pm023419 Prunus mume Pm023419 N 0.827
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N 0.827
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.819
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.818
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.818
Cla012784 Citrullus lanatus Cla012784 N 0.814
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.814
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.813
MDP0000226215 Malus domestica MDP0000226215 N 0.813
MDP0000253904 Malus domestica MDP0000253904 N 0.813
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.812
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.807
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N 0.798
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N 0.798
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N 0.797
MDP0000133817 Malus domestica MDP0000133817 I 0.794
MDP0000143276 Malus domestica MDP0000143276 I 0.794
MDP0000931057 Malus domestica MDP0000931057 N 0.794
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N 0.793
POPTR_0001s16970 Populus trichocarpa POPTR_0001s16970 N 0.788
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.788
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.787
MDP0000124555 Malus domestica MDP0000124555 N 0.784
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.782
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.779
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.779
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.779
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.778
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.774
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.773
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.773
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.773
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.767
Ciclev10022303m.g Citrus clementina Ciclev10022303m.g N 0.764
orange1.1g028843m.g Citrus sinensis orange1.1g028843m.g N 0.764
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.758
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.752
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N 0.750
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I 0.748
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.745
TCM_037383 Theobroma cacao TCM_037383 I 0.745
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.744
Pm005573 Prunus mume Pm005573 I 0.744
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.742
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N 0.739
28226.m000839 Ricinus communis 28226.m000839 I 0.739
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.738
Pm027048 Prunus mume Pm027048 I 0.738
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.737
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.737
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.737
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.735
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.735
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.735
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.734
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.734
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.734
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.734
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.732
Pm005577 Prunus mume Pm005577 I 0.732
Ca_12762 Cicer arietinum Ca_12762 N 0.731
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.730
MDP0000261265 Malus domestica MDP0000261265 I 0.730
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.730
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.729
mgf018735m Mimulus guttatus mgf018735m N 0.729
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.727
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.727
MDP0000887107 Malus domestica MDP0000887107 I 0.727
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.726
F775_19148 Aegilops tauschii F775_19148 I 0.724
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I 0.724
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.724
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.724
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.723
F775_17212 Aegilops tauschii F775_17212 I 0.722
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.722
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.722
Gorai.010G096800 Gossypium raimondii Gorai.010G096800 N 0.722
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.721
TCM_000535 Theobroma cacao TCM_000535 I 0.719
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.717
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.713
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.712
TCM_037379 Theobroma cacao TCM_037379 I 0.712
MDP0000140609 Malus domestica MDP0000140609 I 0.712
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.711
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.710
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.708
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.707
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.707
Aquca_011_00570 Aquilegia coerulea Aquca_011_00570 N 0.706
PK16315.1 Cannabis sativa PK16315.1 I 0.706
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.705
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.705
TCM_004509 Theobroma cacao TCM_004509 I 0.704
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.703
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.702
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.701
TCM_010778 Theobroma cacao TCM_010778 I 0.701
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.701
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.700
PDK_20s1554341g001 Phoenix dactylifera PDK_20s1554341g001 I 0.700
cassava25868.m1 Manihot esculenta cassava25868.m1 I 0.699
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.699
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.699
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.698
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.698
TCM_037377 Theobroma cacao TCM_037377 I 0.698
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.698
Cla011528 Citrullus lanatus Cla011528 I 0.698
Pm013279 Prunus mume Pm013279 I 0.698
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.698
GSMUA_Achr7G18550_001 Musa acuminata GSMUA_Achr7G18550_001 I 0.697
GSMUA_Achr7G18560_001 Musa acuminata GSMUA_Achr7G18560_001 I 0.697
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.697
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.695
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.695
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.695
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.695
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.695
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.695
TCM_037376 Theobroma cacao TCM_037376 I 0.695
TCM_037555 Theobroma cacao TCM_037555 I 0.695
TCM_037559 Theobroma cacao TCM_037559 I 0.695
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.695
Pm005570 Prunus mume Pm005570 I 0.695
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.695
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.695
MDP0000031172 Malus domestica MDP0000031172 I 0.695
MDP0000210851 Malus domestica MDP0000210851 I 0.695
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.695
GSMUA_Achr3G27700_001 Musa acuminata GSMUA_Achr3G27700_001 I 0.694
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.694
evm.TU.supercontig_25.114 Carica papaya evm.TU.supercontig_25.114 I 0.694
MDP0000164048 Malus domestica MDP0000164048 I 0.692
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.690
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.689
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.689
Ca_03154 Cicer arietinum Ca_03154 I 0.689
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.689
MDP0000537324 Malus domestica MDP0000537324 I 0.689
PDK_20s1323901g001 Phoenix dactylifera PDK_20s1323901g001 I 0.689
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.688
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.688
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.688
GSMUA_Achr6G02530_001 Musa acuminata GSMUA_Achr6G02530_001 I 0.687
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.687
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.687
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.686
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.686
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.686
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.686
Si038905m.g Setaria italica Si038905m.g I 0.686
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.686
Eucgr.C03152 Eucalyptus grandis Eucgr.C03152 N 0.686
Eucgr.C03153 Eucalyptus grandis Eucgr.C03153 N 0.686
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.686
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.684
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.684
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.683
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.683
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.683
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.682
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.682
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I 0.681
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.679
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.679
Gorai.001G020500 Gossypium raimondii Gorai.001G020500 N 0.679
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.679
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.678
Pm027047 Prunus mume Pm027047 I 0.678
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.678
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.678
TT2 Arabidopsis thaliana AT5G35550 I 0.677
Bo8g030520 Brassica oleracea Bo8g030520 I 0.677
Bra035532 Brassica rapa Bra035532 I 0.677
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.677
GLYMA20G32510 Glycine max GLYMA20G32510 I 0.677
OB03G30160 Oryza brachyantha OB03G30160 I 0.677
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.677
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.677
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.677
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.677
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.677
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.677
F775_42516 Aegilops tauschii F775_42516 I 0.676
TCM_029121 Theobroma cacao TCM_029121 I 0.676
Bo1g138250 Brassica oleracea Bo1g138250 I 0.675
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.675
Lus10039173.g Linum usitatissimum Lus10039173.g I 0.675
MDP0000184538 Malus domestica MDP0000184538 I 0.675
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.675
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.675
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.674
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.674
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.674
Cucsa.304110 Cucumis sativus Cucsa.304110 I 0.674
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.674
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.674
GSMUA_Achr5G21090_001 Musa acuminata GSMUA_Achr5G21090_001 I 0.673
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.673
mgf001865m Mimulus guttatus mgf001865m I 0.673
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.673
Bra039395 Brassica rapa Bra039395 I 0.672
30068.m002544 Ricinus communis 30068.m002544 I 0.672
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.671
OB06G16110 Oryza brachyantha OB06G16110 I 0.671
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.671
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.671
POPTR_0018s05740 Populus trichocarpa POPTR_0018s05740 I 0.671
cassava16245.m1 Manihot esculenta cassava16245.m1 I 0.671
cassava35464.valid.m1 Manihot esculenta cassava35464.valid.m1 I 0.671
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.671
Lus10013762.g Linum usitatissimum Lus10013762.g I 0.671
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.670
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.670
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.670
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.670
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.670
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.669
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.669
VIT_09s0002g01410 Vitis vinifera VIT_09s0002g01410 I 0.668
30076.m004607 Ricinus communis 30076.m004607 I 0.668
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.667
Eucgr.C03554 Eucalyptus grandis Eucgr.C03554 I 0.667
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.667
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.667
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.667
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.667
Sb09g002680 Sorghum bicolor Sb09g002680 I 0.666
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.666
POPTR_0019s05190 Populus trichocarpa POPTR_0019s05190 I 0.665
POPTR_0019s05200 Populus trichocarpa POPTR_0019s05200 I 0.665
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I 0.665
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.665
Pm005572 Prunus mume Pm005572 I 0.665
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.664
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.664
cassava39393.m1 Manihot esculenta cassava39393.m1 I 0.663
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.663
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.663
MTR_5g079670 Medicago truncatula MTR_5g079670 I 0.662
Pm005571 Prunus mume Pm005571 I 0.662
evm.TU.supercontig_51.138 Carica papaya evm.TU.supercontig_51.138 I 0.662
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.662
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I 0.662
GSMUA_Achr3G21000_001 Musa acuminata GSMUA_Achr3G21000_001 I 0.661
Pm027045 Prunus mume Pm027045 I 0.661
mgf024953m Mimulus guttatus mgf024953m N 0.661