Gorai.001G020500 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.001G020500 T287444_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G020500.1 Myb 29 76
Gorai.001G020500.1 Myb 82 127

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.821
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.787
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.783
Pm013279 Prunus mume Pm013279 I 0.783
TCM_037376 Theobroma cacao TCM_037376 I 0.780
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.780
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.780
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.772
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.772
PK16315.1 Cannabis sativa PK16315.1 I 0.770
TT2 Arabidopsis thaliana AT5G35550 I 0.768
Bo8g030520 Brassica oleracea Bo8g030520 I 0.768
Bra035532 Brassica rapa Bra035532 I 0.768
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.768
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.768
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.768
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.768
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.768
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.768
GSMUA_Achr7G18560_001 Musa acuminata GSMUA_Achr7G18560_001 I 0.766
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.763
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.760
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.760
TCM_037377 Theobroma cacao TCM_037377 I 0.760
Pm005570 Prunus mume Pm005570 I 0.760
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.760
MDP0000031172 Malus domestica MDP0000031172 I 0.760
MDP0000210851 Malus domestica MDP0000210851 I 0.760
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.760
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.759
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.759
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.757
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.757
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.757
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.754
Ca_03154 Cicer arietinum Ca_03154 I 0.754
TCM_037559 Theobroma cacao TCM_037559 I 0.752
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.751
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.751
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.750
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.750
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.749
TCM_000535 Theobroma cacao TCM_000535 I 0.748
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.748
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.747
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.745
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.744
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.743
Si038905m.g Setaria italica Si038905m.g I 0.743
28226.m000839 Ricinus communis 28226.m000839 I 0.743
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.741
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.741
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.741
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.741
TCM_004509 Theobroma cacao TCM_004509 I 0.741
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.741
TCM_010778 Theobroma cacao TCM_010778 I 0.739
Eucgr.J02819 Eucalyptus grandis Eucgr.J02819 N 0.739
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.738
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.738
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.738
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.738
TCM_037379 Theobroma cacao TCM_037379 I 0.737
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.736
Pm027047 Prunus mume Pm027047 I 0.736
OB06G16110 Oryza brachyantha OB06G16110 I 0.733
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.733
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.733
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.733
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.733
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.731
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.731
MDP0000318013 Malus domestica MDP0000318013 I 0.730
OB03G30160 Oryza brachyantha OB03G30160 I 0.729
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.728
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.728
MDP0000437717 Malus domestica MDP0000437717 I 0.728
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.727
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.725
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.724
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.722
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.720
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.719
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.717
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.716
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.715
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.715
GSMUA_Achr7G18550_001 Musa acuminata GSMUA_Achr7G18550_001 I 0.714
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.713
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.713
MDP0000184538 Malus domestica MDP0000184538 I 0.713
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.712
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.712
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.712
TCM_037555 Theobroma cacao TCM_037555 I 0.711
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.711
OGLUM03G21860 Oryza glumaepatula OGLUM03G21860 I 0.709
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.707
Pm005572 Prunus mume Pm005572 I 0.707
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.707
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.704
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.704
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.704
GSMUA_Achr6G02530_001 Musa acuminata GSMUA_Achr6G02530_001 I 0.703
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.702
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I 0.701
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.699
PDK_20s1554341g001 Phoenix dactylifera PDK_20s1554341g001 I 0.698
POPTR_0018s05740 Populus trichocarpa POPTR_0018s05740 I 0.697
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.697
Pm005571 Prunus mume Pm005571 I 0.693
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.693
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.693
TCM_029121 Theobroma cacao TCM_029121 I 0.692
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.691
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.689
Pm027048 Prunus mume Pm027048 I 0.689
Eucgr.C03152 Eucalyptus grandis Eucgr.C03152 N 0.689
Eucgr.C03153 Eucalyptus grandis Eucgr.C03153 N 0.689
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.689
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.688
Sb10g006700 Sorghum bicolor Sb10g006700 I 0.687
Cla011528 Citrullus lanatus Cla011528 I 0.687
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.686
TCM_036404 Theobroma cacao TCM_036404 I 0.686
Cla012721 Citrullus lanatus Cla012721 I 0.686
Pm004199 Prunus mume Pm004199 I 0.686
cassava16245.m1 Manihot esculenta cassava16245.m1 I 0.686
cassava35464.valid.m1 Manihot esculenta cassava35464.valid.m1 I 0.686
Eucgr.F03175 Eucalyptus grandis Eucgr.F03175 I 0.686
Gorai.009G263200 Gossypium raimondii Gorai.009G263200 I 0.686
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.686
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.684
Eucgr.J02816 Eucalyptus grandis Eucgr.J02816 I 0.684
Eucgr.C03554 Eucalyptus grandis Eucgr.C03554 I 0.683
POPTR_0018s03770 Populus trichocarpa POPTR_0018s03770 I 0.682
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.682
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.679
Pm027045 Prunus mume Pm027045 I 0.678
29739.m003784 Ricinus communis 29739.m003784 I 0.678
MDP0000887107 Malus domestica MDP0000887107 I 0.678
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.678
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.676
GSMUA_Achr3G21000_001 Musa acuminata GSMUA_Achr3G21000_001 I 0.676
VIT_04s0008g01830 Vitis vinifera VIT_04s0008g01830 N 0.676
Pm029489 Prunus mume Pm029489 I 0.675
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.674
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.673
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.673
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.673
GSMUA_Achr5G26000_001 Musa acuminata GSMUA_Achr5G26000_001 I 0.672
Si008089m.g Setaria italica Si008089m.g I 0.672
MDP0000140609 Malus domestica MDP0000140609 I 0.672
GLYMA20G32510 Glycine max GLYMA20G32510 I 0.671
POPTR_0006s29080 Populus trichocarpa POPTR_0006s29080 I 0.670
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.670
Pm005573 Prunus mume Pm005573 I 0.670
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.670
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.669
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.669
PGSC0003DMG400030548 Solanum tuberosum PGSC0003DMG400030548 I 0.668
Solyc05g008250.1 Solanum lycopersicum Solyc05g008250.1 I 0.668
VIT_17s0000g02660 Vitis vinifera VIT_17s0000g02660 I 0.668
cassava6228.valid.m1 Manihot esculenta cassava6228.valid.m1 I 0.668
fgenesh1_pm.scaffold_371000001 Physcomitrella patens fgenesh1_pm.scaffold_371000001 I 0.668
Eucgr.B02896 Eucalyptus grandis Eucgr.B02896 I 0.668
PK05970.1 Cannabis sativa PK05970.1 I 0.668
MDP0000159011 Malus domestica MDP0000159011 I 0.667
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I 0.667
PK11717.1 Cannabis sativa PK11717.1 I 0.667
e_gw1.61.201.1 Physcomitrella patens e_gw1.61.201.1 I 0.666
LjT02E24.60.nc Lotus japonicus LjT02E24.60.nc I 0.666
MYB7 Arabidopsis thaliana AT2G16720 I 0.665
POPTR_0005s11410 Populus trichocarpa POPTR_0005s11410 I 0.665
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.665
Bostr.18351s0132 Boechera stricta Bostr.18351s0132 I 0.665
evm.TU.supercontig_25.114 Carica papaya evm.TU.supercontig_25.114 I 0.665
Thhalv10022799m.g Eutrema salsugineum Thhalv10022799m.g I 0.665
AMTR_s00005p00268890 Amborella trichopoda AMTR_s00005p00268890 I 0.664
POPTR_0010s12420 Populus trichocarpa POPTR_0010s12420 I 0.664
POPTR_0017s02990 Populus trichocarpa POPTR_0017s02990 I 0.664
TCM_010839 Theobroma cacao TCM_010839 I 0.664
VIT_01s0011g04760 Vitis vinifera VIT_01s0011g04760 I 0.664
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.664
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.664
Gorai.005G162600 Gossypium raimondii Gorai.005G162600 I 0.664
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.664
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.664
POPTR_0013s11360 Populus trichocarpa POPTR_0013s11360 I 0.662
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.662
MYB7 Arabidopsis lyrata scaffold_303957.1 I 0.662
Pm025102 Prunus mume Pm025102 I 0.662
Cucsa.304110 Cucumis sativus Cucsa.304110 I 0.662
Eucgr.B00865 Eucalyptus grandis Eucgr.B00865 I 0.662
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.662
SapurV1A.0277s0120 Salix purpurea SapurV1A.0277s0120 I 0.662
SapurV1A.1985s0010 Salix purpurea SapurV1A.1985s0010 I 0.662
GLYMA02G41440 Glycine max GLYMA02G41440 I 0.661
MTR_8g020490 Medicago truncatula MTR_8g020490 I 0.661
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.661
TCM_012631 Theobroma cacao TCM_012631 I 0.661
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.661
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.661
30068.m002544 Ricinus communis 30068.m002544 I 0.661
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.661
Ciclev10026112m.g Citrus clementina Ciclev10026112m.g I 0.661
MDP0000250597 Malus domestica MDP0000250597 I 0.661
orange1.1g021220m.g Citrus sinensis orange1.1g021220m.g I 0.661