CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si008089m.g
(
Setaria italica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Si008089m.g
T279737_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GRMZM2G005066
M11056_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$C1_Q2
0.765
0.862
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si008089m
Myb
14
61
RGAWTSKEDDILAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNYL
Si008089m
Myb
67
135
RGNISDEEEDLIIRLHKLLGNSGFPFLFDKFSSEPDVSVSGVAGRWSLIAARLPGRTDNEIKNYWNSTL
Links
Other
Myb/SANT
family TFs
Other
Setaria italica
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Db02046
Panicum virgatum
Pavir.Db02046
I
0.841
GRMZM2G701063
Zea mays
GRMZM2G701063
I
0.788
OB06G16110
Oryza brachyantha
OB06G16110
I
0.784
Sb10g006700
Sorghum bicolor
Sb10g006700
I
0.771
GRMZM2G005066
Zea mays
GRMZM2G005066
D
0.765
ORUFI06G06900
Oryza rufipogon
ORUFI06G06900
I
0.763
ORGLA06G0059500
Oryza glaberrima
ORGLA06G0059500
I
0.763
cassava28702.m1
Manihot esculenta
cassava28702.m1
I
0.762
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.761
Sb01g032770
Sorghum bicolor
Sb01g032770
I
0.758
TCM_004509
Theobroma cacao
TCM_004509
I
0.757
TCM_010778
Theobroma cacao
TCM_010778
I
0.755
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
0.753
Eucgr.C00721
Eucalyptus grandis
Eucgr.C00721
I
0.752
cassava7672.valid.m1
Manihot esculenta
cassava7672.valid.m1
I
0.752
Traes_4DL_8A9D9ACCB
Triticum aestivum
Traes_4DL_8A9D9ACCB
I
0.752
VIT_04s0008g01800
Vitis vinifera
VIT_04s0008g01800
I
0.752
TCM_037376
Theobroma cacao
TCM_037376
I
0.752
PDK_20s1716541g001
Phoenix dactylifera
PDK_20s1716541g001
I
0.750
F775_17212
Aegilops tauschii
F775_17212
I
0.750
Pm005570
Prunus mume
Pm005570
I
0.749
POPTR_0006s23840
Populus trichocarpa
POPTR_0006s23840
I
0.749
SapurV1A.0710s0070
Salix purpurea
SapurV1A.0710s0070
I
0.749
MDP0000031172
Malus domestica
MDP0000031172
I
0.749
PRUPE_ppa022205mg
Prunus persica
PRUPE_ppa022205mg
I
0.749
MDP0000210851
Malus domestica
MDP0000210851
I
0.749
Traes_4DL_26A958CDD
Triticum aestivum
Traes_4DL_26A958CDD
I
0.745
F775_19148
Aegilops tauschii
F775_19148
I
0.745
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.744
TCM_037379
Theobroma cacao
TCM_037379
I
0.741
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
0.739
Eucgr.C03555
Eucalyptus grandis
Eucgr.C03555
I
0.735
ORGLA03G0196700
Oryza glaberrima
ORGLA03G0196700
I
0.734
OGLUM03G21860
Oryza glumaepatula
OGLUM03G21860
I
0.734
MTR_4g125520
Medicago truncatula
MTR_4g125520
I
0.733
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.728
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
0.727
gene15392-v1.0-hybrid
Fragaria vesca
gene15392-v1.0-hybrid
I
0.727
TCM_037377
Theobroma cacao
TCM_037377
I
0.727
gene15390-v1.0-hybrid
Fragaria vesca
gene15390-v1.0-hybrid
I
0.726
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
0.725
Ca_03154
Cicer arietinum
Ca_03154
I
0.724
VIT_04s0008g01820
Vitis vinifera
VIT_04s0008g01820
I
0.724
TCM_000535
Theobroma cacao
TCM_000535
I
0.724
Eucgr.C00723
Eucalyptus grandis
Eucgr.C00723
I
0.722
Gorai.001G015200
Gossypium raimondii
Gorai.001G015200
I
0.720
TCM_037559
Theobroma cacao
TCM_037559
I
0.719
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.719
VIT_11s0016g01320
Vitis vinifera
VIT_11s0016g01320
I
0.718
GSMUA_Achr8G22690_001
Musa acuminata
GSMUA_Achr8G22690_001
I
0.718
GLYMA20G32500
Glycine max
GLYMA20G32500
I
0.717
VIT_09s0002g01400
Vitis vinifera
VIT_09s0002g01400
I
0.717
Ciclev10009286m.g
Citrus clementina
Ciclev10009286m.g
I
0.716
28226.m000839
Ricinus communis
28226.m000839
I
0.716
GSMUA_Achr9G16040_001
Musa acuminata
GSMUA_Achr9G16040_001
I
0.715
Si038905m.g
Setaria italica
Si038905m.g
I
0.715
orange1.1g025602m.g
Citrus sinensis
orange1.1g025602m.g
I
0.715
Eucgr.C03151
Eucalyptus grandis
Eucgr.C03151
I
0.715
TRIUR3_09734
Triticum urartu
TRIUR3_09734
I
0.714
GLYMA10G35050
Glycine max
GLYMA10G35050
I
0.714
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.712
PRUPE_ppa010252mg
Prunus persica
PRUPE_ppa010252mg
I
0.712
Pm013279
Prunus mume
Pm013279
I
0.712
Eucgr.F03176
Eucalyptus grandis
Eucgr.F03176
I
0.712
TT2
Arabidopsis lyrata
fgenesh2_kg.7__3049__AT5G35550.1
I
0.711
TT2
Arabidopsis thaliana
AT5G35550
I
0.711
Bo8g030520
Brassica oleracea
Bo8g030520
I
0.711
Bra035532
Brassica rapa
Bra035532
I
0.711
Carubv10006684m.g
Capsella rubella
Carubv10006684m.g
I
0.711
Cagra.5428s0005
Capsella grandiflora
Cagra.5428s0005
I
0.711
Gorai.001G020600
Gossypium raimondii
Gorai.001G020600
I
0.711
Bostr.29044s0068
Boechera stricta
Bostr.29044s0068
I
0.711
Thhalv10003461m.g
Eutrema salsugineum
Thhalv10003461m.g
I
0.711
evm.TU.supercontig_126.33
Carica papaya
evm.TU.supercontig_126.33
I
0.709
Eucgr.C00826
Eucalyptus grandis
Eucgr.C00826
I
0.709
OB03G30160
Oryza brachyantha
OB03G30160
I
0.709
Pm005571
Prunus mume
Pm005571
I
0.709
PK16315.1
Cannabis sativa
PK16315.1
I
0.708
LjT02E24.130.nc
Lotus japonicus
LjT02E24.130.nc
I
0.706
Solyc12g049300.1
Solanum lycopersicum
Solyc12g049300.1
I
0.706
gene25060-v1.0-hybrid
Fragaria vesca
gene25060-v1.0-hybrid
N
0.705
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.704
POPTR_0018s05530
Populus trichocarpa
POPTR_0018s05530
I
0.704
Pm005572
Prunus mume
Pm005572
I
0.701
PRUPE_ppa023768mg
Prunus persica
PRUPE_ppa023768mg
I
0.701
TCM_037555
Theobroma cacao
TCM_037555
I
0.700
MDP0000184538
Malus domestica
MDP0000184538
I
0.698
GLYMA07G04240
Glycine max
GLYMA07G04240
I
0.697
SapurV1A.0059s0150
Salix purpurea
SapurV1A.0059s0150
I
0.697
GLYMA16G00931
Glycine max
GLYMA16G00931
I
0.697
Eucgr.C02096
Eucalyptus grandis
Eucgr.C02096
I
0.696
LjSGA_029658.1
Lotus japonicus
LjSGA_029658.1
I
0.696
cassava36364.valid.m1
Manihot esculenta
cassava36364.valid.m1
I
0.696
VIT_11s0016g01310
Vitis vinifera
VIT_11s0016g01310
I
0.696
SapurV1A.0035s0030
Salix purpurea
SapurV1A.0035s0030
I
0.695
gene15386-v1.0-hybrid
Fragaria vesca
gene15386-v1.0-hybrid
I
0.694
PDK_20s1918041g001
Phoenix dactylifera
PDK_20s1918041g001
I
0.693
gene15389-v1.0-hybrid
Fragaria vesca
gene15389-v1.0-hybrid
I
0.693
POPTR_0005s11410
Populus trichocarpa
POPTR_0005s11410
I
0.691
F775_42516
Aegilops tauschii
F775_42516
I
0.691
PRUPE_ppa023789mg
Prunus persica
PRUPE_ppa023789mg
I
0.691
GLYMA10G35061
Glycine max
GLYMA10G35061
I
0.689
LjT02E24.110.nc
Lotus japonicus
LjT02E24.110.nc
I
0.688
GSMUA_Achr3G07950_001
Musa acuminata
GSMUA_Achr3G07950_001
I
0.688
Eucgr.J02816
Eucalyptus grandis
Eucgr.J02816
I
0.687
MDP0000437717
Malus domestica
MDP0000437717
I
0.687
Pm027047
Prunus mume
Pm027047
I
0.687
VIT_11s0016g01300
Vitis vinifera
VIT_11s0016g01300
I
0.685
SapurV1A.0710s0050
Salix purpurea
SapurV1A.0710s0050
I
0.685
gene07416-v1.0-hybrid
Fragaria vesca
gene07416-v1.0-hybrid
I
0.684
Gorai.004G151000
Gossypium raimondii
Gorai.004G151000
I
0.684
PRUPE_ppa024074mg
Prunus persica
PRUPE_ppa024074mg
I
0.683
PDK_20s13009436g002
Phoenix dactylifera
PDK_20s13009436g002
I
0.683
POPTR_0001s11100
Populus trichocarpa
POPTR_0001s11100
I
0.680
30068.m002544
Ricinus communis
30068.m002544
I
0.680
POPTR_0003s14420
Populus trichocarpa
POPTR_0003s14420
I
0.680
cassava34176.m1
Manihot esculenta
cassava34176.m1
I
0.680
GSMUA_Achr10G17610_001
Musa acuminata
GSMUA_Achr10G17610_001
I
0.680
VIT_13s0084g00530
Vitis vinifera
VIT_13s0084g00530
I
0.679
POPTR_0018s05750
Populus trichocarpa
POPTR_0018s05750
I
0.679
Gorai.004G044000
Gossypium raimondii
Gorai.004G044000
I
0.678
SapurV1A.0035s0040
Salix purpurea
SapurV1A.0035s0040
I
0.678
MTR_8g020490
Medicago truncatula
MTR_8g020490
I
0.678
VIT_04s0008g01810
Vitis vinifera
VIT_04s0008g01810
I
0.675
GRMZM2G419239
Zea mays
GRMZM2G419239
I
0.675
PRUPE_ppa019380mg
Prunus persica
PRUPE_ppa019380mg
I
0.674
GSMUA_Achr4G21700_001
Musa acuminata
GSMUA_Achr4G21700_001
I
0.674
Pm029489
Prunus mume
Pm029489
I
0.674
POPTR_0018s05740
Populus trichocarpa
POPTR_0018s05740
I
0.673
LjT02E24.60.nc
Lotus japonicus
LjT02E24.60.nc
I
0.673
SapurV1A.0263s0400
Salix purpurea
SapurV1A.0263s0400
I
0.673
cassava2758.m1
Manihot esculenta
cassava2758.m1
I
0.672
Gorai.001G020500
Gossypium raimondii
Gorai.001G020500
N
0.672
LPERR03G18050
Leersia perrieri
LPERR03G18050
N
0.671
Gorai.004G130900
Gossypium raimondii
Gorai.004G130900
I
0.671
Aquca_076_00099
Aquilegia coerulea
Aquca_076_00099
I
0.671
Traes_5BL_AED68C680
Triticum aestivum
Traes_5BL_AED68C680
I
0.670
Traes_5AL_56F30392D
Triticum aestivum
Traes_5AL_56F30392D
I
0.670
Traes_5DL_1868E2A6C
Triticum aestivum
Traes_5DL_1868E2A6C
I
0.670
GLYMA17G05831
Glycine max
GLYMA17G05831
I
0.670
F775_31191
Aegilops tauschii
F775_31191
I
0.670
orange1.1g021503m.g
Citrus sinensis
orange1.1g021503m.g
I
0.670
TRIUR3_11890
Triticum urartu
TRIUR3_11890
I
0.670
GLYMA13G16890
Glycine max
GLYMA13G16890
I
0.670
Gorai.010G087200
Gossypium raimondii
Gorai.010G087200
I
0.670
GRMZM2G431156
Zea mays
GRMZM2G431156
I
0.670
Ciclev10028908m.g
Citrus clementina
Ciclev10028908m.g
I
0.670
evm.TU.supercontig_28.71
Carica papaya
evm.TU.supercontig_28.71
I
0.670
gene08694-v1.0-hybrid
Fragaria vesca
gene08694-v1.0-hybrid
I
0.670
POPTR_0006s29080
Populus trichocarpa
POPTR_0006s29080
I
0.670
Eucgr.J02819
Eucalyptus grandis
Eucgr.J02819
N
0.669
Eucgr.C03554
Eucalyptus grandis
Eucgr.C03554
I
0.669
Pm005573
Prunus mume
Pm005573
I
0.669
PRUPE_ppa015883mg
Prunus persica
PRUPE_ppa015883mg
I
0.669
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
0.668
GSMUA_Achr7G18560_001
Musa acuminata
GSMUA_Achr7G18560_001
I
0.668
PK14784.1
Cannabis sativa
PK14784.1
I
0.667
gene18691-v1.0-hybrid
Fragaria vesca
gene18691-v1.0-hybrid
I
0.667
MDP0000915330
Malus domestica
MDP0000915330
I
0.667
VIT_15s0046g00170
Vitis vinifera
VIT_15s0046g00170
I
0.667
Eucgr.D02390
Eucalyptus grandis
Eucgr.D02390
I
0.667
Lus10000470.g
Linum usitatissimum
Lus10000470.g
I
0.667
evm.TU.supercontig_96.57
Carica papaya
evm.TU.supercontig_96.57
I
0.667
Lus10033438.g
Linum usitatissimum
Lus10033438.g
I
0.667
Gorai.008G126700
Gossypium raimondii
Gorai.008G126700
I
0.667
MDP0000157940
Malus domestica
MDP0000157940
I
0.667
Sb07g024890
Sorghum bicolor
Sb07g024890
I
0.666
SapurV1A.1127s0040
Salix purpurea
SapurV1A.1127s0040
I
0.665
VIT_04s0008g01840
Vitis vinifera
VIT_04s0008g01840
I
0.665
SapurV1A.0591s0010
Salix purpurea
SapurV1A.0591s0010
I
0.665
POPTR_0004s14510
Populus trichocarpa
POPTR_0004s14510
I
0.665
Cla011528
Citrullus lanatus
Cla011528
I
0.664
Pm018338
Prunus mume
Pm018338
I
0.664
PRUPE_ppa009439mg
Prunus persica
PRUPE_ppa009439mg
I
0.664
GRMZM2G084583
Zea mays
GRMZM2G084583
I
0.664
Si015081m.g
Setaria italica
Si015081m.g
I
0.663
Pavir.J16675
Panicum virgatum
Pavir.J16675
I
0.663
PRUPE_ppa023812mg
Prunus persica
PRUPE_ppa023812mg
I
0.663
Pavir.J11802
Panicum virgatum
Pavir.J11802
I
0.663
Cla016084
Citrullus lanatus
Cla016084
I
0.662
Bostr.7867s1358
Boechera stricta
Bostr.7867s1358
I
0.662
Cucsa.370600
Cucumis sativus
Cucsa.370600
I
0.662
GRMZM2G077789
Zea mays
GRMZM2G077789
I
0.662
MYB32
Arabidopsis thaliana
AT4G34990
I
0.662
Cagra.2350s0045
Capsella grandiflora
Cagra.2350s0045
I
0.662
Carubv10005438m.g
Capsella rubella
Carubv10005438m.g
I
0.662
MDP0000318013
Malus domestica
MDP0000318013
I
0.661
orange1.1g023056m.g
Citrus sinensis
orange1.1g023056m.g
I
0.661
POPTR_0003s14430
Populus trichocarpa
POPTR_0003s14430
I
0.661
Lus10000411.g
Linum usitatissimum
Lus10000411.g
I
0.661
Ciclev10002068m.g
Citrus clementina
Ciclev10002068m.g
I
0.661
SapurV1A.0059s0160
Salix purpurea
SapurV1A.0059s0160
I
0.661