LjT02E24.110.nc (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 LjT02E24.110.nc T291023_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRMZM2G005066
M11056_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$C1_Q2 		0.673 0.720
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.666 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjT02E24.110.nc Myb 14 61
LjT02E24.110.nc Myb 67 112

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjT02E24.60.nc Lotus japonicus LjT02E24.60.nc I 0.876
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.862
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.840
Ca_03154 Cicer arietinum Ca_03154 I 0.806
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.797
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.789
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.787
TCM_004509 Theobroma cacao TCM_004509 I 0.786
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.784
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.784
TCM_037559 Theobroma cacao TCM_037559 I 0.782
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.781
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.778
TCM_037376 Theobroma cacao TCM_037376 I 0.778
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.778
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.775
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.775
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.775
MDP0000031172 Malus domestica MDP0000031172 I 0.775
MDP0000210851 Malus domestica MDP0000210851 I 0.775
Pm005570 Prunus mume Pm005570 I 0.775
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.773
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.773
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.772
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.772
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.772
Pm013279 Prunus mume Pm013279 I 0.771
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.771
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.771
PK16315.1 Cannabis sativa PK16315.1 I 0.771
Si038905m.g Setaria italica Si038905m.g I 0.771
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.770
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.768
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.768
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.768
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.767
Eucgr.C03153 Eucalyptus grandis Eucgr.C03153 N 0.764
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.764
Eucgr.C03152 Eucalyptus grandis Eucgr.C03152 N 0.764
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.763
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.762
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.762
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.761
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.761
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.761
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.760
MDP0000437717 Malus domestica MDP0000437717 I 0.760
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.759
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.759
TCM_010778 Theobroma cacao TCM_010778 I 0.757
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.757
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.756
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.756
TCM_000535 Theobroma cacao TCM_000535 I 0.755
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.755
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.755
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.754
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.754
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.753
TCM_037379 Theobroma cacao TCM_037379 I 0.753
TCM_037377 Theobroma cacao TCM_037377 I 0.751
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.751
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.751
evm.TU.supercontig_25.114 Carica papaya evm.TU.supercontig_25.114 I 0.750
Pm005572 Prunus mume Pm005572 I 0.748
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.748
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.748
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.745
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.745
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.745
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.743
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.742
Pm027047 Prunus mume Pm027047 I 0.741
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.741
TCM_029121 Theobroma cacao TCM_029121 I 0.740
MDP0000887107 Malus domestica MDP0000887107 I 0.739
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.738
MDP0000184538 Malus domestica MDP0000184538 I 0.737
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.737
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.736
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.736
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.736
Pm027045 Prunus mume Pm027045 I 0.735
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.735
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.734
TT2 Arabidopsis thaliana AT5G35550 I 0.734
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.734
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.734
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.734
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.734
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.734
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.733
MDP0000140609 Malus domestica MDP0000140609 I 0.733
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.733
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.733
Lus10033473.g Linum usitatissimum Lus10033473.g I 0.733
TCM_037555 Theobroma cacao TCM_037555 I 0.733
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.731
Bra035532 Brassica rapa Bra035532 I 0.731
Bo8g030520 Brassica oleracea Bo8g030520 I 0.731
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.731
OB03G30160 Oryza brachyantha OB03G30160 I 0.731
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.730
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.730
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.728
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.728
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.728
Pm027048 Prunus mume Pm027048 I 0.728
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.727
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.724
Sb10g006700 Sorghum bicolor Sb10g006700 I 0.721
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I 0.721
Pm005571 Prunus mume Pm005571 I 0.721
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.721
OB06G16110 Oryza brachyantha OB06G16110 I 0.719
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.719
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.719
28226.m000839 Ricinus communis 28226.m000839 I 0.718
GSMUA_Achr4G21700_001 Musa acuminata GSMUA_Achr4G21700_001 I 0.716
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.711
Eucgr.J02819 Eucalyptus grandis Eucgr.J02819 N 0.711
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.710
OGLUM03G21860 Oryza glumaepatula OGLUM03G21860 I 0.707
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.705
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.705
Gorai.003G021100 Gossypium raimondii Gorai.003G021100 I 0.705
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.704
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.703
Eucgr.C03554 Eucalyptus grandis Eucgr.C03554 I 0.703
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.701
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.700
MDP0000318013 Malus domestica MDP0000318013 I 0.700
GLYMA20G32510 Glycine max GLYMA20G32510 I 0.699
POPTR_0018s05740 Populus trichocarpa POPTR_0018s05740 I 0.699
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.698
Eucgr.F03175 Eucalyptus grandis Eucgr.F03175 I 0.698
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.698
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.695
Pm005573 Prunus mume Pm005573 I 0.694
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.694
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.694
MTR_8g020490 Medicago truncatula MTR_8g020490 I 0.693
Eucgr.J02816 Eucalyptus grandis Eucgr.J02816 I 0.692
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.692
29739.m003784 Ricinus communis 29739.m003784 I 0.692
Eucgr.F02583 Eucalyptus grandis Eucgr.F02583 I 0.691
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.690
VIT_04s0008g01830 Vitis vinifera VIT_04s0008g01830 N 0.690
Si008089m.g Setaria italica Si008089m.g I 0.688
cassava24925.valid.m1 Manihot esculenta cassava24925.valid.m1 I 0.687
evm.TU.supercontig_6.280 Carica papaya evm.TU.supercontig_6.280 I 0.687
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.686
cassava2597.m1 Manihot esculenta cassava2597.m1 I 0.684
28154.m000040 Ricinus communis 28154.m000040 I 0.682
Gorai.001G020500 Gossypium raimondii Gorai.001G020500 N 0.682
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.682
POPTR_0006s29080 Populus trichocarpa POPTR_0006s29080 I 0.681
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.681
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.680
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.680
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.680
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.680
GSMUA_Achr7G18560_001 Musa acuminata GSMUA_Achr7G18560_001 I 0.680
Gorai.009G288900 Gossypium raimondii Gorai.009G288900 I 0.678
PK21058.1 Cannabis sativa PK21058.1 I 0.678
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.678
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.678
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.675
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.675
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.674
GRMZM2G005066 Zea mays GRMZM2G005066 D 0.673
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.673
cassava41021.m1 Manihot esculenta cassava41021.m1 I 0.673
cassava3467.m1 Manihot esculenta cassava3467.m1 N 0.673
Pm029489 Prunus mume Pm029489 I 0.673
mgf006108m Mimulus guttatus mgf006108m I 0.672
Ca_12762 Cicer arietinum Ca_12762 N 0.672
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.672
F775_17212 Aegilops tauschii F775_17212 I 0.672
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I 0.671
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.671
F775_19148 Aegilops tauschii F775_19148 I 0.671
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.670
LjSGA_007368.1 Lotus japonicus LjSGA_007368.1 I 0.669
GLYMA04G38240 Glycine max GLYMA04G38240 I 0.669
cassava4975.m1 Manihot esculenta cassava4975.m1 I 0.669
GLYMA06G16820 Glycine max GLYMA06G16820 I 0.669
cassava1644.valid.m1 Manihot esculenta cassava1644.valid.m1 I 0.669
Ca_10014 Cicer arietinum Ca_10014 I 0.668
POPTR_0018s03770 Populus trichocarpa POPTR_0018s03770 I 0.667
MYB23 Arabidopsis thaliana AT5G40330 D 0.666
Bra025589 Brassica rapa Bra025589 I 0.666
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.666
Cucsa.119640 Cucumis sativus Cucsa.119640 N 0.666
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.666
VIT_18s0117g00200 Vitis vinifera VIT_18s0117g00200 I 0.666
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.666
Cla000782 Citrullus lanatus Cla000782 N 0.666
Cla011528 Citrullus lanatus Cla011528 I 0.665
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.664
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.664
PK23594.1 Cannabis sativa PK23594.1 I 0.664
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.663
GSMUA_Achr3G27700_001 Musa acuminata GSMUA_Achr3G27700_001 I 0.663
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.662
GLYMA07G04210 Glycine max GLYMA07G04210 I 0.662
Gorai.005G162600 Gossypium raimondii Gorai.005G162600 I 0.662
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.662
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.662
TCM_012057 Theobroma cacao TCM_012057 I 0.661