evm.TU.supercontig_124.57 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_124.57 T287048_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.747 0.806
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.747 0.806
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.685 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_124.57 Myb 10 57
evm.model.supercontig_124.57 Myb 63 108

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000578193 Malus domestica MDP0000578193 I 0.813
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.807
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.805
Pm024725 Prunus mume Pm024725 I 0.803
TCM_012057 Theobroma cacao TCM_012057 I 0.802
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.801
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.800
MDP0000650225 Malus domestica MDP0000650225 I 0.800
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.788
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.788
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.774
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.774
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.770
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.764
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.758
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I 0.752
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.747
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.747
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.747
WER Arabidopsis thaliana AT5G14750 D 0.747
Bo2g012170 Brassica oleracea Bo2g012170 I 0.747
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.747
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.747
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.744
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.740
TCM_016886 Theobroma cacao TCM_016886 I 0.739
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.736
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.735
Bo9g165670 Brassica oleracea Bo9g165670 I 0.730
Bra008740 Brassica rapa Bra008740 I 0.730
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.724
MDP0000537324 Malus domestica MDP0000537324 I 0.721
Bra025311 Brassica rapa Bra025311 I 0.720
POPTR_0015s08700 Populus trichocarpa POPTR_0015s08700 I 0.719
MDP0000266683 Malus domestica MDP0000266683 I 0.717
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.713
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.713
Bra023486 Brassica rapa Bra023486 I 0.713
Bo7g090950 Brassica oleracea Bo7g090950 I 0.709
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.708
MDP0000199965 Malus domestica MDP0000199965 I 0.708
TCM_010360 Theobroma cacao TCM_010360 I 0.708
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.707
Ca_03154 Cicer arietinum Ca_03154 I 0.704
MDP0000164048 Malus domestica MDP0000164048 I 0.702
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.702
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.700
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.697
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.697
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.697
Pm006678 Prunus mume Pm006678 I 0.696
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.695
TCM_000535 Theobroma cacao TCM_000535 I 0.695
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.694
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.693
Pm027045 Prunus mume Pm027045 I 0.692
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.691
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.690
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.690
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.689
TCM_004509 Theobroma cacao TCM_004509 I 0.689
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.689
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.689
LjT02E24.60.nc Lotus japonicus LjT02E24.60.nc I 0.686
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.686
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.685
MYB23 Arabidopsis thaliana AT5G40330 D 0.685
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.685
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.685
Bra025589 Brassica rapa Bra025589 I 0.685
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.685
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.684
Si038905m.g Setaria italica Si038905m.g I 0.683
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.682
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.682
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.681
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.681
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.680
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.680
TCM_037376 Theobroma cacao TCM_037376 I 0.679
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.679
Eucgr.B03324 Eucalyptus grandis Eucgr.B03324 N 0.679
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.679
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.679
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.679
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.679
LjT16O05.150.nd Lotus japonicus LjT16O05.150.nd I 0.679
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.679
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.679
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.678
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.677
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.677
MDP0000031172 Malus domestica MDP0000031172 I 0.676
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.676
MDP0000210851 Malus domestica MDP0000210851 I 0.676
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.676
TCM_010778 Theobroma cacao TCM_010778 I 0.676
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.676
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.676
Pm005570 Prunus mume Pm005570 I 0.676
SapurV1A.1178s0040 Salix purpurea SapurV1A.1178s0040 N 0.675
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.675
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.674
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.674
GL1 Arabidopsis thaliana AT3G27920 I 0.674
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.674
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.674
TCM_037559 Theobroma cacao TCM_037559 I 0.672
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.672
cassava41021.m1 Manihot esculenta cassava41021.m1 I 0.672
Pm005571 Prunus mume Pm005571 I 0.671
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.671
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.670
TCM_037379 Theobroma cacao TCM_037379 I 0.670
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.669
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.669
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I 0.669
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.669
Pm013279 Prunus mume Pm013279 I 0.669
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.668
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.667
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.666
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.666
TCM_037377 Theobroma cacao TCM_037377 I 0.666
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.665
MDP0000184538 Malus domestica MDP0000184538 I 0.665
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.664
Bra039065 Brassica rapa Bra039065 I 0.663
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I 0.662
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.662
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.662