cassava41021.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava41021.m1 T284266_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.666 0.670
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.666 0.670
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava41021.m1 Myb 14 61
cassava41021.m1 Myb 67 110

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava3467.m1 Manihot esculenta cassava3467.m1 N 0.794
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.742
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.717
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.715
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.714
Pm005572 Prunus mume Pm005572 I 0.710
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.710
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.710
POPTR_0018s03770 Populus trichocarpa POPTR_0018s03770 I 0.707
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.706
TCM_004509 Theobroma cacao TCM_004509 I 0.706
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.706
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.706
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.706
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.702
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.702
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.702
Si038905m.g Setaria italica Si038905m.g I 0.701
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.701
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.699
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.699
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.698
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.698
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.697
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.697
TCM_037376 Theobroma cacao TCM_037376 I 0.697
Pm013279 Prunus mume Pm013279 I 0.697
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.697
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.697
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.697
MDP0000437717 Malus domestica MDP0000437717 I 0.697
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.697
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.697
Ca_03154 Cicer arietinum Ca_03154 I 0.697
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.697
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.697
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.697
Pm005571 Prunus mume Pm005571 I 0.695
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.694
Pm005570 Prunus mume Pm005570 I 0.694
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.694
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.694
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.694
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.694
MDP0000031172 Malus domestica MDP0000031172 I 0.694
MDP0000210851 Malus domestica MDP0000210851 I 0.694
TCM_037377 Theobroma cacao TCM_037377 I 0.692
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.692
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.692
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.691
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.691
TCM_037559 Theobroma cacao TCM_037559 I 0.689
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.689
28226.m000839 Ricinus communis 28226.m000839 I 0.689
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.689
TCM_037379 Theobroma cacao TCM_037379 I 0.689
Pm029489 Prunus mume Pm029489 I 0.688
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.688
PK16315.1 Cannabis sativa PK16315.1 I 0.688
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.688
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.686
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.686
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.686
Pm027047 Prunus mume Pm027047 I 0.684
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.684
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.684
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.683
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.683
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.682
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.682
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.682
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.681
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.681
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.681
MDP0000184538 Malus domestica MDP0000184538 I 0.680
Ca_12762 Cicer arietinum Ca_12762 N 0.679
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.679
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.679
GSMUA_Achr4G21700_001 Musa acuminata GSMUA_Achr4G21700_001 I 0.679
POPTR_0006s29080 Populus trichocarpa POPTR_0006s29080 I 0.678
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.678
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.677
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.677
TCM_010778 Theobroma cacao TCM_010778 I 0.677
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.677
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.676
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.676
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.675
29739.m003784 Ricinus communis 29739.m003784 I 0.675
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.674
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.673
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.673
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.673
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.672
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.672
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.672
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.672
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.672
TCM_000535 Theobroma cacao TCM_000535 I 0.672
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.670
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.670
TT2 Arabidopsis thaliana AT5G35550 I 0.670
MDP0000318013 Malus domestica MDP0000318013 I 0.670
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.670
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.670
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.670
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.670
Bra035532 Brassica rapa Bra035532 I 0.670
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.670
Bo8g030520 Brassica oleracea Bo8g030520 I 0.670
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.669
OB06G16110 Oryza brachyantha OB06G16110 I 0.668
OB03G30160 Oryza brachyantha OB03G30160 I 0.668
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.668
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.668
MYB49 Arabidopsis thaliana AT5G54230 D 0.666
Thhalv10014125m.g Eutrema salsugineum Thhalv10014125m.g I 0.666
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.666
Bostr.26833s0846 Boechera stricta Bostr.26833s0846 I 0.666
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.666
Cagra.1629s0007 Capsella grandiflora Cagra.1629s0007 I 0.666
Bra029033 Brassica rapa Bra029033 I 0.666
fgenesh1_pg.C_scaffold_8001466 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001466 I 0.666
Carubv10026801m.g Capsella rubella Carubv10026801m.g I 0.666
Bo3g022210 Brassica oleracea Bo3g022210 I 0.666
fgenesh1_pm.C_scaffold_8001114 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001114 I 0.666
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.665
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.664
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.663
Pm027045 Prunus mume Pm027045 I 0.662
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.662
SapurV1A.0930s0010 Salix purpurea SapurV1A.0930s0010 I 0.662
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.661
SapurV1A.1968s0080 Salix purpurea SapurV1A.1968s0080 I 0.661
SapurV1A.3493s0010 Salix purpurea SapurV1A.3493s0010 I 0.661