LjT16O05.150.nd (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 LjT16O05.150.nd T291031_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.682 0.806
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.682 0.806
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.682 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjT16O05.150.nd Myb 10 57
LjT16O05.150.nd Myb 63 108

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000578193 Malus domestica MDP0000578193 I 0.764
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.756
Pm024725 Prunus mume Pm024725 I 0.745
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.734
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.729
TCM_012057 Theobroma cacao TCM_012057 I 0.725
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.724
MDP0000650225 Malus domestica MDP0000650225 I 0.719
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.712
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.709
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.708
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.702
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.699
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.690
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I 0.687
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.686
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.685
Bra008740 Brassica rapa Bra008740 I 0.682
Bra025589 Brassica rapa Bra025589 I 0.682
Bo9g165670 Brassica oleracea Bo9g165670 I 0.682
Bo2g012170 Brassica oleracea Bo2g012170 I 0.682
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.682
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.682
WER Arabidopsis thaliana AT5G14750 D 0.682
MYB23 Arabidopsis thaliana AT5G40330 D 0.682
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.682
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.682
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.682
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.682
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.682
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.682
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.682
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.682
POPTR_0015s08700 Populus trichocarpa POPTR_0015s08700 I 0.679
Pm006678 Prunus mume Pm006678 I 0.679
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.679
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.679
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.676
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.663
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.662
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.662
GL1 Arabidopsis thaliana AT3G27920 I 0.662
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.662