Eucgr.J02212 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.J02212 T286956_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.806 0.849
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.806 0.849
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.714 0.817
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.J02212.1 Myb 14 61
Eucgr.J02212.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WER Arabidopsis thaliana AT5G14750 D 0.806
Bo2g012170 Brassica oleracea Bo2g012170 I 0.806
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.806
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.806
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.806
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.806
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.806
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.805
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.805
Pm024725 Prunus mume Pm024725 I 0.803
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.799
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.799
MDP0000578193 Malus domestica MDP0000578193 I 0.793
TCM_012057 Theobroma cacao TCM_012057 I 0.792
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.790
Bo9g165670 Brassica oleracea Bo9g165670 I 0.789
Bra008740 Brassica rapa Bra008740 I 0.789
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.789
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.781
MDP0000650225 Malus domestica MDP0000650225 I 0.779
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.775
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.775
Bra023486 Brassica rapa Bra023486 I 0.770
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.764
POPTR_0015s08700 Populus trichocarpa POPTR_0015s08700 I 0.761
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.760
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.758
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.755
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.755
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.749
TCM_016886 Theobroma cacao TCM_016886 I 0.741
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.735
Bra025311 Brassica rapa Bra025311 I 0.734
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I 0.732
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.725
Bo7g090950 Brassica oleracea Bo7g090950 I 0.722
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.717
MYB23 Arabidopsis thaliana AT5G40330 D 0.714
Bra025589 Brassica rapa Bra025589 I 0.714
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.714
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.714
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.714
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.714
GL1 Arabidopsis thaliana AT3G27920 I 0.703
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.703
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.703
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.703
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I 0.703
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.701
LjT16O05.150.nd Lotus japonicus LjT16O05.150.nd I 0.699
MDP0000266683 Malus domestica MDP0000266683 I 0.695
MDP0000537324 Malus domestica MDP0000537324 I 0.692
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.691
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.691
TCM_004509 Theobroma cacao TCM_004509 I 0.690
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.690
TCM_037376 Theobroma cacao TCM_037376 I 0.689
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.689
VIT_11s0016g05660 Vitis vinifera VIT_11s0016g05660 N 0.689
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.689
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.689
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.686
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.686
Pm005570 Prunus mume Pm005570 I 0.686
MDP0000031172 Malus domestica MDP0000031172 I 0.686
MDP0000210851 Malus domestica MDP0000210851 I 0.686
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.686
TCM_010360 Theobroma cacao TCM_010360 I 0.685
TCM_037377 Theobroma cacao TCM_037377 I 0.685
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.684
Pm027045 Prunus mume Pm027045 I 0.680
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.680
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.679
MDP0000199965 Malus domestica MDP0000199965 I 0.679
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I 0.678
Bra039065 Brassica rapa Bra039065 I 0.677
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.677
TCM_010778 Theobroma cacao TCM_010778 I 0.677
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.677
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.676
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.676
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.676
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.674
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.674
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.673
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.673
Pm006678 Prunus mume Pm006678 I 0.673
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.673
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.673
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.672
MDP0000164048 Malus domestica MDP0000164048 I 0.672
TCM_000535 Theobroma cacao TCM_000535 I 0.671
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.670
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.670
SapurV1A.1178s0040 Salix purpurea SapurV1A.1178s0040 N 0.670
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.669
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.669
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.668
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.666
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.666
VIT_11s0016g05690 Vitis vinifera VIT_11s0016g05690 N 0.665
Ca_03154 Cicer arietinum Ca_03154 I 0.665
Pm005571 Prunus mume Pm005571 I 0.665
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.665
Si038905m.g Setaria italica Si038905m.g I 0.663
Eucgr.B03324 Eucalyptus grandis Eucgr.B03324 N 0.662
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I 0.662
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.662