CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_20430
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1Plus.C_20430
T391210_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_20430
Zinc cluster
89
128
HACVYCRRSHMTCDLERPCTRCIKRNIGHLCHDEPRDSDS
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0007s01930
Populus trichocarpa
POPTR_0007s01930
N
PRUPE_ppa010562mg
Prunus persica
PRUPE_ppa010562mg
N
VIT_05s0102g00400
Vitis vinifera
VIT_05s0102g00400
N
Pm007352
Prunus mume
Pm007352
N
29569.m000147
Ricinus communis
29569.m000147
N
cassava17506.valid.m1
Manihot esculenta
cassava17506.valid.m1
N
Ciclev10021886m.g
Citrus clementina
Ciclev10021886m.g
N
evm.TU.supercontig_9.289
Carica papaya
evm.TU.supercontig_9.289
N
Gorai.011G141900
Gossypium raimondii
Gorai.011G141900
N
orange1.1g029989m.g
Citrus sinensis
orange1.1g029989m.g
N
SapurV1A.0834s0160
Salix purpurea
SapurV1A.0834s0160
N
SapurV1A.1078s0010
Salix purpurea
SapurV1A.1078s0010
N