CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0007s01930
(
Populus trichocarpa
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
POPTR_0007s01930
T180089_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0007s01930.1
FAR1
75
166
EFYELYGRRMGFTIRNNRTRRSLKDNSIIGREFVCSKEGFRGGKSPKGENRVFQSRPITREGCNAMLRIAAKDGGKWVIYGFIKEHNHDLNP
Links
Other
FAR1
family TFs
Other
Populus trichocarpa
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0834s0160
Salix purpurea
SapurV1A.0834s0160
N
0.911
SapurV1A.1078s0010
Salix purpurea
SapurV1A.1078s0010
N
0.911
TCM_020031
Theobroma cacao
TCM_020031
N
0.889
cassava17506.valid.m1
Manihot esculenta
cassava17506.valid.m1
N
0.889
Gorai.011G141900
Gossypium raimondii
Gorai.011G141900
N
0.889
Ciclev10021886m.g
Citrus clementina
Ciclev10021886m.g
N
0.844
evm.TU.supercontig_9.289
Carica papaya
evm.TU.supercontig_9.289
N
0.844
orange1.1g029989m.g
Citrus sinensis
orange1.1g029989m.g
N
0.844
VIT_05s0102g00400
Vitis vinifera
VIT_05s0102g00400
N
0.833
29569.m000147
Ricinus communis
29569.m000147
N
0.833
PRUPE_ppa010562mg
Prunus persica
PRUPE_ppa010562mg
N
0.822
Pm007352
Prunus mume
Pm007352
N
0.822