MTR_6g465450 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_6g465450 T002914_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.719 0.840
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.719 0.840
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.708 0.840
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.708 0.840
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.708 0.840
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.708 0.840
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.698 0.840
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.698 0.840
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.698 0.840
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.679 0.740
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.679 0.740
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.679 0.740
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.679 0.740
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.679 0.740
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.679 0.740
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.679 0.740
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.679 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH26591 AP2 52 103

Links

Other AP2 family TFs
Other Medicago truncatula TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
12664_YJR127C Saccharomyces mikatae 12664_YJR127C I
12764_Multiple Saccharomyces paradoxus 12764_Multiple I
13784_YJR127C Saccharomyces bayanus 13784_YJR127C I
16099_Multiple Saccharomyces mikatae 16099_Multiple I
17638_YML081W Saccharomyces paradoxus 17638_YML081W I
18114_YML081W Saccharomyces bayanus 18114_YML081W I
AACERI_AaceriAER159C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER159C I
AGOS_AER159C Ashbya gossypii AGOS_AER159C I
CAGL0H04213g Candida glabrata CAGL0H04213g I
CAGL0M00594g Candida glabrata CAGL0M00594g I
KAFR_0B06810 Kazachstania africana KAFR_0B06810 I
KAFR_0E04270 Kazachstania africana KAFR_0E04270 I
KLLA0_B04477g Kluyveromyces lactis KLLA0_B04477g I
KLTH0D18062g Kluyveromyces thermotolerans KLTH0D18062g I
Kwal_16621 Kluyveromyces waltii Kwal_16621 I
LALA0_S08e05644g Lachancea lanzarotensis LALA0_S08e05644g I
NCAS_0A06250 Naumovozyma castellii NCAS_0A06250 I
NDAI_0D03240 Naumovozyma dairenensis NDAI_0D03240 I
NDAI_0J02850 Naumovozyma dairenensis NDAI_0J02850 I
RSF2 Saccharomyces cerevisiae YJR127C D
SAKL0G18062g Lachancea kluyveri SAKL0G18062g I
Scas_Contig703.23 Saccharomyces castellii Scas_Contig703.23 I
SKUD_162303 Saccharomyces kudriavzevii SKUD_162303 I
SU7_2441 Saccharomyces arboricola SU7_2441 I
TBLA_0B06160 Tetrapisispora blattae TBLA_0B06160 I
TBLA_0E04770 Tetrapisispora blattae TBLA_0E04770 I
TDA9 Saccharomyces cerevisiae YML081W D
TDEL_0D00670 Torulaspora delbrueckii TDEL_0D00670 I
TPHA_0B00380 Tetrapisispora phaffii TPHA_0B00380 I
ZBAI_03167 Zygosaccharomyces bailii ZBAI_03167 I
ZBAI_03168 Zygosaccharomyces bailii ZBAI_03168 I
ZBAI_08875 Zygosaccharomyces bailii ZBAI_08875 I
ZYRO0B14894g Zygosaccharomyces rouxii ZYRO0B14894g I