OB08G30790 (Oryza brachyantha)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OB08G30790 T003050_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.701 0.816
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.686 0.816
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.682 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.682 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.682 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB08G30790.1 AP2 43 94

Links

Other AP2 family TFs
Other Oryza brachyantha TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000490701 Angiostrongylus cantonensis ACAC_0000490701 N 0.000
ACOC_0001036301 Angiostrongylus costaricensis ACOC_0001036301 N 0.000
ANCDUO_06311 Ancylostoma duodenale ANCDUO_06311 N 0.000
ASU_05009 Ascaris suum ASU_05009 N 0.000
Bm10163 Brugia malayi Bm10163 N 0.000
Bm7640 Brugia malayi Bm7640 N 0.000
BXY_0855500 Bursaphelenchus xylophilus BXY_0855500 N 0.000
DICVIV_09532 Dictyocaulus viviparus DICVIV_09532 N 0.000
EEL_0000412901 Elaeophora elaphi EEL_0000412901 N 0.000
EVEC_0001166801 Enterobius vermicularis EVEC_0001166801 N 0.000
Hba_21527 Heterorhabditis bacteriophora Hba_21527 N 0.000
HCOI00637900 Haemonchus contortus HCOI00637900 N 0.000
HPBE_0001810001 Heligmosomoides bakeri HPBE_0001810001 N 0.000
HPLM_0001532901 Haemonchus placei HPLM_0001532901 N 0.000
L596_g9224 Steinernema carpocapsae L596_g9224 N 0.000
L889_g25145 Steinernema feltiae L889_g25145 N 0.000
L892_g9710 Steinernema scapterisci L892_g9710 N 0.000
L898_g34810 Steinernema monticolum L898_g34810 N 0.000
MhA1_Contig354.frz3.gene60 Meloidogyne hapla MhA1_Contig354.frz3.gene60 N 0.000
Minc03019 Meloidogyne incognita Minc03019 N 0.000
nAv.1.0.1.g04870 Acanthocheilonema viteae nAv.1.0.1.g04870 N 0.000
nDi.2.2.2.g01589 Dirofilaria immitis nDi.2.2.2.g01589 N 0.000
NECAME_03333 Necator americanus NECAME_03333 N 0.000
nOo.2.0.1.g00722 Onchocerca ochengi nOo.2.0.1.g00722 N 0.000
RSKR_0001108600 Rhabditophanes kr3021 RSKR_0001108600 N 0.000
scaffold1322-EXSNAP2012.4 Pristionchus exspectatus scaffold1322-EXSNAP2012.4 N 0.000
SMUV_0000944701 Syphacia muris SMUV_0000944701 N 0.000
TCLT_0000625901 Thelazia callipaeda TCLT_0000625901 N 0.000
WBGene00239750 Onchocerca volvulus WBGene00239750 N 0.000
WUBG_04888 Wuchereria bancrofti WUBG_04888 N 0.000