Lus10034902.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10034902.g T008897_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.743 0.860
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.715 0.820
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.683 0.780
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.680 0.820
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.679 0.780
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.679 0.780
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.679 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10034902 AP2 73 124

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01225 Capronia coronata A1O1_01225 I 0.000
A1O3_08807 Capronia epimyces A1O3_08807 I 0.000
A1O5_06113 Cladophialophora psammophila A1O5_06113 I 0.000
A1O7_01699 Cladophialophora yegresii A1O7_01699 I 0.000
A1O9_00139 Exophiala aquamarina A1O9_00139 I 0.000
AB07871.1 Alternaria brassicicola AB07871.1 I 0.000
ACLA_048970 Aspergillus clavatus CADACLAG00004962 I 0.000
AFUA_4G09710 Aspergillus fumigatus CADAFUAG00008093 I 0.000
ANIA_01848 Aspergillus nidulans CADANIAG00008499 D 0.000
ARB_01430 Arthroderma benhamiae ARB_01430 N 0.000
ATEG_03734 Aspergillus terreus CADATEAG00005983 I 0.000
BDDG_05536 Blastomyces dermatitidis BDDG_05536 I 0.000
CADAFLAG00001948 Aspergillus flavus CADAFLAG00001948 I 0.000
CADAFLAG00004078 Aspergillus flavus CADAFLAG00004078 I 0.000
CADANGAG00004451 Aspergillus niger CADANGAG00004451 I 0.000
CADAORAG00001789 Aspergillus oryzae CADAORAG00001789 I 0.000
CADAORAG00006466 Aspergillus oryzae CADAORAG00006466 I 0.000
CIMG_07923 Coccidioides immitis CIMG_07923 I 0.000
COCC4DRAFT_71571 Bipolaris maydis COCC4DRAFT_71571 I 0.000
COCCADRAFT_2138 Bipolaris zeicola COCCADRAFT_2138 I 0.000
COCMIDRAFT_101771 Bipolaris oryzae COCMIDRAFT_101771 I 0.000
COCSADRAFT_95191 Bipolaris sorokiniana COCSADRAFT_95191 I 0.000
COCVIDRAFT_33542 Bipolaris victoriae COCVIDRAFT_33542 I 0.000
CPC735_019860 Coccidioides posadasii CPC735_019860 I 0.000
EPUS_03517 Endocarpon pusillum EPUS_03517 I 0.000
estExt_Genewise1.C_140356 Cochliobolus heterostrophus C5 estExt_Genewise1.C_140356 I 0.000
EURHEDRAFT_407958 Aspergillus ruber EURHEDRAFT_407958 I 0.000
e_gw1.00609.122.1 Aspergillus carbonarius e_gw1.00609.122.1 I 0.000
G647_10121 Cladophialophora carrionii G647_10121 I 0.000
H101_05391 Trichophyton interdigitale H101_05391 I 0.000
H102_03533 Trichophyton rubrum H102_03533 I 0.000
H105_03557 Trichophyton soudanense H105_03557 I 0.000
HCBG_08145 Histoplasma capsulatum HCBG_08145 I 0.000
HMPREF1120_00298 Exophiala dermatitidis HMPREF1120_00298 I 0.000
HMPREF1541_06468 Cyphellophora europaea HMPREF1541_06468 I 0.000
LEMA_P064820.1 Leptosphaeria maculans LEMA_P064820.1 I 0.000
MCYG_02108 Microsporum canis MCYG_02108 I 0.000
MCYG_02108 Arthroderma otae MCYG_02108 I 0.000
MGYG_03046 Microsporum gypseum MGYG_03046 I 0.000
NFIA_106320 Neosartorya fischeri CADNFIAG00009607 I 0.000
PAAG_06446 Paracoccidioides sp lutzii PAAG_06446 I 0.000
PABG_02841 Paracoccidioides brasiliensis PABG_02841 I 0.000
PDE_05453 Penicillium oxalicum PDE_05453 I 0.000
PDIP_71760 Penicillium digitatum PDIP_71760 I 0.000
PITC_025970 Penicillium italicum PITC_025970 I 0.000
PTRG_02861 Pyrenophora triticirepentis PTRG_02861 I 0.000
PTT_14613 Pyrenophora teres PTT_14613 I 0.000
PV04_00230 Capronia semiimmersa PV04_00230 I 0.000
PV05_09886 Exophiala xenobiotica PV05_09886 I 0.000
PV06_05595 Exophiala oligosperma PV06_05595 I 0.000
PV07_09358 Cladophialophora immunda PV07_09358 I 0.000
PV08_01386 Exophiala spinifera PV08_01386 I 0.000
PV09_07171 Verruconis gallopava PV09_07171 I 0.000
PV10_01961 Exophiala mesophila PV10_01961 I 0.000
PV11_09346 Exophiala sideris PV11_09346 I 0.000
PVAR5_2620 Byssochlamys spectabilis PVAR5_2620 I 0.000
SETTUDRAFT_166291 Setosphaeria turcica SETTUDRAFT_166291 I 0.000
SNOG_03490 Stagonospora nodorum SNOG_03490 I 0.000
TEQG_01149 Trichophyton equinum TEQG_01149 I 0.000
TESG_07954 Trichophyton tonsurans TESG_07954 I 0.000
TRV_02966 Trichophyton verrucosum TRV_02966 I 0.000
UREG_02223 Uncinocarpus reesii UREG_02223 I 0.000
W97_04157 Coniosporium apollinis W97_04157 I 0.000
Z517_02285 Fonsecaea pedrosoi Z517_02285 I 0.000
Z518_04968 Rhinocladiella mackenziei Z518_04968 I 0.000
Z519_04625 Cladophialophora bantiana Z519_04625 I 0.000