Pavir.J32829 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.J32829 T009634_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J32829.1.p AP2 5 58

Links

Other AP2 family TFs
Other Panicum virgatum TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA026544 Oryza indica BGIOSGA026544 N 0.781
BGIOSGA026545 Oryza indica BGIOSGA026545 N 0.774
BRADI1G49570 Brachypodium distachyon BRADI1G49570 I 0.681
BRADI4G35630 Brachypodium distachyon BRADI4G35630 I 0.698
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.731
DREB1B Oryza indica BGIOSGA029417 N 0.703
DREB1H Oryza sativa OS09G0522100 I 0.701
DREB1H Oryza indica BGIOSGA029416 I 0.701
F775_00827 Aegilops tauschii F775_00827 I 0.682
F775_27111 Aegilops tauschii F775_27111 I 0.680
GRMZM2G069126 Zea mays GRMZM2G069126 I 0.693
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.718
GRMZM2G124011 Zea mays GRMZM2G124011 I 0.750
GRMZM2G175856 Zea mays GRMZM2G175856 N 0.836
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.715
OGLUM08G23770 Oryza glumaepatula OGLUM08G23770 N 0.781
OGLUM09G17420 Oryza glumaepatula OGLUM09G17420 I 0.701
OMERI09G12480 Oryza meridionalis OMERI09G12480 I 0.707
ONIVA09G17880 Oryza nivara ONIVA09G17880 N 0.703
ONIVA09G17890 Oryza nivara ONIVA09G17890 I 0.701
OPUNC09G15260 Oryza punctata OPUNC09G15260 I 0.689
OPUNC09G15280 Oryza punctata OPUNC09G15280 I 0.707
ORGLA08G0220100 Oryza glaberrima ORGLA08G0220100 I 0.734
ORGLA08G0220200 Oryza glaberrima ORGLA08G0220200 N 0.781
ORGLA09G0133000 Oryza glaberrima ORGLA09G0133000 N 0.703
ORGLA09G0133100 Oryza glaberrima ORGLA09G0133100 I 0.701
ORUFI09G18190 Oryza rufipogon ORUFI09G18190 N 0.703
ORUFI09G18200 Oryza rufipogon ORUFI09G18200 I 0.701
Pavir.Ba01281 Panicum virgatum Pavir.Ba01281 I 0.710
Pavir.Fa00114 Panicum virgatum Pavir.Fa00114 N 0.830
Pavir.J03892 Panicum virgatum Pavir.J03892 I 0.689
Pavir.J03893 Panicum virgatum Pavir.J03893 I 0.694
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.719
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.719
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.713
Sb02g030340 Sorghum bicolor Sb02g030340 I 0.708
Sb05g006275 Sorghum bicolor Sb05g006275 I 0.710
Sb07g025210 Sorghum bicolor Sb07g025210 N 0.830
Si031001m.g Setaria italica Si031001m.g I 0.719
Traes_5BL_0C3609EF0 Triticum aestivum Traes_5BL_0C3609EF0 N 0.677
Traes_5BL_5299B6B33 Triticum aestivum Traes_5BL_5299B6B33 N 0.710
Traes_5BL_D16B19610 Triticum aestivum Traes_5BL_D16B19610 I 0.680