Thhalv10029052m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10029052m.g T010002_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-9
M06633_2.00 		Arabidopsis thaliana
NNNNNNNDBCACCGACMHH
DDKGTCGGTGVHNNNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR5_col_a 		0.789 0.920
RAP2-9
M06634_2.00 		Arabidopsis thaliana
NCACCGACMHH
DDKGTCGGTGN		 Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a 		0.789 0.920
ERF010
M06690_2.00 		Arabidopsis thaliana
HHNHHDYCACCGHCD
HGDCGGTGRHDDNDD		 Dap-seq
OMalley et al.(2016)
DEAR2_col_a 		0.762 0.880
ERF010
M06691_2.00 		Arabidopsis thaliana
NNNHDBCACCGACAH
DTGTCGGTGVHDNNN		 Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a 		0.762 0.880
RAP2-10
M00850_2.00 		Arabidopsis thaliana
NNRCCGHCNN
NNGDCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DEAR4 		0.761 0.880
ERF011
M06628_2.00 		Arabidopsis thaliana
YHNHHDYCACCGHCN
NGDCGGTGRHDDNDR		 Dap-seq
OMalley et al.(2016)
CEJ1_col_a 		0.760 0.840
ERF011
M06629_2.00 		Arabidopsis thaliana
NDNCACCGACMHH
DDKGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a 		0.760 0.840
ERF008
M00844_2.00 		Arabidopsis thaliana
SHRCCGHC
GDCGGYDS		 PBM
Franco-Zorrilla et al.(2014)
DEAR3 		0.758 0.880
ERF008
M01048_2.00 		Arabidopsis thaliana
CRCCGMCN
NGKCGGYG		 PBM
Sullivan et al.(2014)
pTH7672 		0.758 0.880
ERF008
M06602_2.00 		Arabidopsis thaliana
NNNNNBCACCGACAHHN
NDDTGTCGGTGVNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR3_col_a 		0.758 0.880
ERF008
M06603_2.00 		Arabidopsis thaliana
NNBCACCGACAWH
DWTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a 		0.758 0.880
RAP2-1
M06582_2.00 		Arabidopsis thaliana
NHDYCRCCGMCAH
DTGKCGGYGRHDN		 Dap-seq
OMalley et al.(2016)
RAP21_col_a 		0.723 0.820
RAP2-1
M06583_2.00 		Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN
NNNNNHDDTGTCGGTGVHDN		 Dap-seq
OMalley et al.(2016)
RAP21_colamp_a 		0.723 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10029052m AP2 22 73

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG004656.1 Alligator sinensis Alligator_sinensis_CCG004656.1 I
Cmyd_10000422 Chelonia mydas Cmyd_10000422 I
ENSAMEG00000000235 Ailuropoda melanoleuca ENSAMEG00000000235 I
ENSAMXG00000009564 Astyanax mexicanus ENSAMXG00000009564 I
ENSCSAG00000004521 Chlorocebus sabaeus ENSCSAG00000004521 I
ENSGMOG00000009783 Gadus morhua ENSGMOG00000009783 I
ENSGMOG00000013274 Gadus morhua ENSGMOG00000013274 I
ENSLACG00000003269 Latimeria chalumnae ENSLACG00000003269 I
ENSLOCG00000005321 Lepisosteus oculatus ENSLOCG00000005321 I
ENSMLUG00000028063 Myotis lucifugus ENSMLUG00000028063 I
ENSMPUG00000007099 Mustela putorius furo ENSMPUG00000007099 I
ENSNLEG00000011114 Nomascus leucogenys ENSNLEG00000011114 I
ENSOARG00000004745 Ovis aries ENSOARG00000004745 I
ENSONIG00000016360 Oreochromis niloticus ENSONIG00000016360 I
ENSP00000222305-D1 Bos grunniens ENSP00000222305-D1 I
ENSPANG00000011040 Papio anubis ENSPANG00000011040 I
ENSPFOG00000005160 Poecilia formosa ENSPFOG00000005160 I
ENSPFOG00000017027 Poecilia formosa ENSPFOG00000017027 I
ENSPPYG00000009855 Pongo abelii ENSPPYG00000009855 I
ENSPSIG00000008600 Pelodiscus sinensis ENSPSIG00000008600 I
ENSSTOG00000022219 Ictidomys tridecemlineatus ENSSTOG00000022219 I
ENSXMAG00000005137 Xiphophorus maculatus ENSXMAG00000005137 I
ENSXMAG00000006484 Xiphophorus maculatus ENSXMAG00000006484 I
Myotis_brandtii_Usf2_10035177 Myotis brandtii Myotis_brandtii_Usf2_10035177 I
Ogr06118 Ophisaurus gracilis Ogr06118 I
Pvit_11612 Pogona vitticeps Pvit_11612 I
usf1 Tetraodon nigroviridis ENSTNIG00000014361 I
usf1 Oryzias latipes ENSORLG00000015402 I
usf1 Takifugu rubripes ENSTRUG00000005343 I
usf1 Gasterosteus aculeatus ENSGACG00000005115 I
USF2 Pan troglodytes ENSPTRG00000010836 I
USF2 Pteropus vampyrus ENSPVAG00000004161 I
Usf2 Rattus norvegicus ENSRNOG00000053725 I
USF2 Sus scrofa ENSSSCG00000002885 I
USF2 Takifugu rubripes ENSTRUG00000005182 I
USF2 Oryctolagus cuniculus ENSOCUG00000026259 I
USF2 Oryzias latipes ENSORLG00000015114 I
USF2 Bos taurus ENSBTAG00000017035 I
USF2 Canis familiaris ENSCAFG00000007054 I
USF2 Callithrix jacchus ENSCJAG00000010451 I
USF2 Cavia porcellus ENSCPOG00000012147 I
usf2 Danio rerio ENSDARG00000020228 I
USF2 Dasypus novemcinctus ENSDNOG00000003072 I
USF2 Equus caballus ENSECAG00000008583 I
USF2 Felis catus ENSFCAG00000008894 I
USF2 Homo sapiens ENSG00000105698 D
USF2 Gasterosteus aculeatus ENSGACG00000012475 I
USF2 Loxodonta africana ENSLAFG00000029360 I
USF2 Microcebus murinus ENSMICG00000001519 I
USF2 Macaca mulatta ENSMMUG00000011291 I
USF2 Monodelphis domestica ENSMODG00000013843 I
Usf2 Mus musculus ENSMUSG00000058239 D
USF2 Anolis carolinensis ENSACAG00000010293 I
USF2 Otolemur garnettii ENSOGAG00000001476 I
USF2 Procavia capensis ENSPCAG00000013941 I
usf2.L Xenopus laevis XB-GENE-991248 I
usf2.S Xenopus laevis XB-GENE-6253011 I