USF2 (Callithrix jacchus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCJAG00000010451 T033343_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
USF2
M04076_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF2_eDBD_HT-SELEX 		0.903 0.981
USF2
M08050_2.00 		Homo sapiens
NNVYCACGTGACHNNN
NNNDGTCACGTGRBNN		 ChIP-seq
Mathelier et al.(2014)
MA0526.2 		0.903 0.981
USF2
M07785_2.00 		Homo sapiens
NGTCACGTGRBSVVV
BBBSVYCACGTGACN		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF2_Stanford 		0.903 0.981
USF2
M07786_2.00 		Homo sapiens
NVGTCACGTGRBSVVV
BBBSVYCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF2_Stanford 		0.903 0.981
USF2
M07787_2.00 		Homo sapiens
RGTCACGTGVB
VBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_USF2_Stanford 		0.903 0.981
USF2
M07788_2.00 		Homo sapiens
NGTCACGTGRBSV
BSVYCACGTGACN		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF2_Stanford 		0.903 0.981
USF2
M07789_2.00 		Homo sapiens
RGTCACGTGRBSV
BSVYCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
K562_USF2_Stanford 		0.903 0.981
USF2
M08715_2.00 		Homo sapiens
NVGTCACGTGVBSVNNVNB
VNBNNBSVBCACGTGACBN		 Misc
Kulakovskiy et al.(2013)
USF2_HUMAN.H11MO.0.A 		0.903 0.981
USF2
M09812_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_01 		0.903 0.981
USF2
M09813_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_02 		0.903 0.981
USF2
M09814_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_Q6_01 		0.903 0.981
USF2
M09815_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_Q6 		0.903 0.981
USF2
M04077_2.00 		Homo sapiens
VNCAYGTGACN
NGTCACRTGNB		 SELEX
Yin et al.(2017)
USF2_eDBD_Methyl-HT-SELEX 		0.903 0.981
Usf2
M01752_2.00 		Mus musculus
NNCACGTGAN
NTCACGTGNN		 PBM
Weirauch et al.(2014)
pTH5265 		0.860 0.962
Usf2
M08777_2.00 		Mus musculus
NVGTCACGTGVBSVNNVNB
VNBNNBSVBCACGTGACBN		 Misc
Kulakovskiy et al.(2013)
USF2_MOUSE.H11MO.0.A 		0.860 0.962
Usf2
M09479_2.00 		Mus musculus
NNCAYGTGVY
RBCACRTGNN		 Misc
Heinz et al.(2010)
C2C12-Usf2_GSE36030 		0.860 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000019421 bHLH 204 258
ENSCJAP00000019446 bHLH 109 163

Links

Other bHLH family TFs
Other Callithrix jacchus TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
USF2 Otolemur garnettii ENSOGAG00000001476 I 0.903
USF2 Loxodonta africana ENSLAFG00000029360 I 0.903
USF2 Sus scrofa ENSSSCG00000002885 I 0.903
ENSPANG00000011040 Papio anubis ENSPANG00000011040 I 0.903
ENSSTOG00000022219 Ictidomys tridecemlineatus ENSSTOG00000022219 I 0.903
USF2 Microcebus murinus ENSMICG00000001519 I 0.903
USF2 Macaca mulatta ENSMMUG00000011291 I 0.903
USF2 Oryctolagus cuniculus ENSOCUG00000026259 I 0.903
ENSNLEG00000011114 Nomascus leucogenys ENSNLEG00000011114 I 0.903
ENSMPUG00000007099 Mustela putorius furo ENSMPUG00000007099 I 0.903
USF2 Pan troglodytes ENSPTRG00000010836 I 0.903
Alligator_sinensis_CCG004656.1 Alligator sinensis Alligator_sinensis_CCG004656.1 I 0.903
USF2 Pteropus vampyrus ENSPVAG00000004161 I 0.903
ENSPPYG00000009855 Pongo abelii ENSPPYG00000009855 I 0.903
USF2 Canis familiaris ENSCAFG00000007054 I 0.903
USF2 Cavia porcellus ENSCPOG00000012147 I 0.903
USF2 Bos taurus ENSBTAG00000017035 I 0.903
USF2 Procavia capensis ENSPCAG00000013941 I 0.903
ENSAMEG00000000235 Ailuropoda melanoleuca ENSAMEG00000000235 I 0.903
ENSCSAG00000004521 Chlorocebus sabaeus ENSCSAG00000004521 I 0.903
ENSP00000222305-D1 Bos grunniens ENSP00000222305-D1 I 0.903
USF2 Homo sapiens ENSG00000105698 D 0.903
USF2 Felis catus ENSFCAG00000008894 I 0.903
USF2 Equus caballus ENSECAG00000008583 I 0.903
USF2 Dasypus novemcinctus ENSDNOG00000003072 I 0.903
ENSOARG00000004745 Ovis aries ENSOARG00000004745 I 0.903
USF2 Takifugu rubripes ENSTRUG00000005182 I 0.877
Myotis_brandtii_Usf2_10035177 Myotis brandtii Myotis_brandtii_Usf2_10035177 I 0.877
Cmyd_10000422 Chelonia mydas Cmyd_10000422 I 0.877
Pvit_11612 Pogona vitticeps Pvit_11612 I 0.877
ENSPSIG00000008600 Pelodiscus sinensis ENSPSIG00000008600 I 0.877
USF2 Monodelphis domestica ENSMODG00000013843 I 0.877
ENSLACG00000003269 Latimeria chalumnae ENSLACG00000003269 I 0.877
ENSAMXG00000009564 Astyanax mexicanus ENSAMXG00000009564 I 0.877
usf2 Danio rerio ENSDARG00000020228 I 0.877
ENSGMOG00000013274 Gadus morhua ENSGMOG00000013274 I 0.877
ENSLOCG00000005321 Lepisosteus oculatus ENSLOCG00000005321 I 0.877
ENSMLUG00000028063 Myotis lucifugus ENSMLUG00000028063 I 0.877
USF2 Oryzias latipes ENSORLG00000015114 I 0.877
USF2 Anolis carolinensis ENSACAG00000010293 I 0.877
Ogr06118 Ophisaurus gracilis Ogr06118 I 0.877
USF2 Gasterosteus aculeatus ENSGACG00000012475 I 0.877
usf2.S Xenopus laevis XB-GENE-6253011 I 0.875
usf1 Oryzias latipes ENSORLG00000015402 I 0.864
usf1 Tetraodon nigroviridis ENSTNIG00000014361 I 0.864
usf1 Gasterosteus aculeatus ENSGACG00000005115 I 0.864
usf1 Takifugu rubripes ENSTRUG00000005343 I 0.864
Usf2 Mus musculus ENSMUSG00000058239 D 0.860
Usf2 Rattus norvegicus ENSRNOG00000053725 I 0.860
usf2.L Xenopus laevis XB-GENE-991248 I 0.849
ENSLACG00000001157 Latimeria chalumnae ENSLACG00000001157 I 0.847