estExt_Genewise1Plus.C_12733 (Neurospora discreta)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 estExt_Genewise1Plus.C_12733 T013920_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU07246
M01653_2.00 		Neurospora crassa
NDCRCGN
NCGYGHN		 PBM
Weirauch et al.(2014)
pTH8957 		0.872 1.000
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00 		PBM CONSTRUCTS
NNACGCGW
WCGCGTNN		 PBM
Lambert et al.(2019)
pTH9838 		0.789 0.577
ANIA_03154
M01650_2.00 		Aspergillus nidulans
NNACGCG
CGCGTNN		 PBM
Weirauch et al.(2014)
pTH8232 		0.778 0.487
MBP1
M00003_2.00 		Saccharomyces cerevisiae
VACGCGWD
HWCGCGTB		 PBM
Badis et al.(2008)
MBP1_4486 		0.762 0.603
MBP1
M01514_2.00 		Saccharomyces cerevisiae
NNNNDCRCGH
DCGYGHNNNN		 PBM
Zhu et al.(2009)
Mbp1 		0.762 0.603
MBP1
M07434_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1 		0.762 0.603
MBP1
M08472_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 Misc
DeBoer et al.(2011)
YDL056W_500 		0.762 0.603
NCU07587
M01654_2.00 		Neurospora crassa
NNNDCRCGN
NCGYGHNNN		 PBM
Weirauch et al.(2014)
pTH9687 		0.700 0.474
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_12733 APSES 30 110

Links

Other APSES family TFs
Other Neurospora discreta TFs

430 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30076.m004456 Ricinus communis 30076.m004456 N 0.000
AC233899.1_FG002 Zea mays AC233899.1_FG002 N 0.000
BGIOSGA005582 Oryza indica BGIOSGA005582 N 0.000
BGIOSGA011741 Oryza indica BGIOSGA011741 N 0.000
BGIOSGA032814 Oryza indica BGIOSGA032814 N 0.000
BHLH67 Arabidopsis thaliana AT3G61950 N 0.000
Bo2g075510 Brassica oleracea Bo2g075510 N 0.000
Bo4g006950 Brassica oleracea Bo4g006950 N 0.000
Bo8g097470 Brassica oleracea Bo8g097470 N 0.000
Bostr.13158s0200 Boechera stricta Bostr.13158s0200 N 0.000
Bostr.25993s0085 Boechera stricta Bostr.25993s0085 N 0.000
Bra007644 Brassica rapa Bra007644 N 0.000
Bra008017 Brassica rapa Bra008017 N 0.000
BRADI1G71990 Brachypodium distachyon BRADI1G71990 N 0.000
BRADI1G77070 Brachypodium distachyon BRADI1G77070 N 0.000
BRADI2G22810 Brachypodium distachyon BRADI2G22810 N 0.000
BRADI3G38510 Brachypodium distachyon BRADI3G38510 N 0.000
BRADI3G58360 Brachypodium distachyon BRADI3G58360 N 0.000
Cagra.0483s0048 Capsella grandiflora Cagra.0483s0048 N 0.000
Carubv10018614m.g Capsella rubella Carubv10018614m.g N 0.000
cassava29786.valid.m1 Manihot esculenta cassava29786.valid.m1 N 0.000
cassava34492.m1 Manihot esculenta cassava34492.m1 N 0.000
cassava39415.m1 Manihot esculenta cassava39415.m1 N 0.000
Ca_22410 Cicer arietinum Ca_22410 N 0.000
chr3.CM0208.290.nc Lotus japonicus chr3.CM0208.290.nc N 0.000
Ciclev10020360m.g Citrus clementina Ciclev10020360m.g N 0.000
Eucgr.H02788 Eucalyptus grandis Eucgr.H02788 N 0.000
Eucgr.H04738 Eucalyptus grandis Eucgr.H04738 N 0.000
evm.TU.supercontig_57.85 Carica papaya evm.TU.supercontig_57.85 N 0.000
F775_03517 Aegilops tauschii F775_03517 N 0.000
fgenesh2_kg.5__2692__AT3G61950.1 Arabidopsis lyrata fgenesh2_kg.5__2692__AT3G61950.1 N 0.000
gene16221-v1.0-hybrid Fragaria vesca gene16221-v1.0-hybrid N 0.000
gene18608-v1.0-hybrid Fragaria vesca gene18608-v1.0-hybrid N 0.000
gene18888-v1.0-hybrid Fragaria vesca gene18888-v1.0-hybrid N 0.000
GLYMA07G05500 Glycine max GLYMA07G05500 N 0.000
GLYMA16G02020 Glycine max GLYMA16G02020 N 0.000
Gorai.003G041800 Gossypium raimondii Gorai.003G041800 N 0.000
Gorai.007G113200 Gossypium raimondii Gorai.007G113200 N 0.000
Gorai.007G113300 Gossypium raimondii Gorai.007G113300 N 0.000
GRMZM2G008691 Zea mays GRMZM2G008691 N 0.000
GRMZM2G045883 Zea mays GRMZM2G045883 N 0.000
GRMZM2G475289 Zea mays GRMZM2G475289 N 0.000
GSMUA_Achr11G02740_001 Musa acuminata GSMUA_Achr11G02740_001 N 0.000
GSMUA_Achr11G21440_001 Musa acuminata GSMUA_Achr11G21440_001 N 0.000
GSMUA_Achr8G12330_001 Musa acuminata GSMUA_Achr8G12330_001 N 0.000
GSMUA_Achr9G15000_001 Musa acuminata GSMUA_Achr9G15000_001 N 0.000
LPERR02G27220 Leersia perrieri LPERR02G27220 N 0.000
LPERR03G01610 Leersia perrieri LPERR03G01610 N 0.000
LPERR05G23220 Leersia perrieri LPERR05G23220 N 0.000
LPERR09G09700 Leersia perrieri LPERR09G09700 N 0.000
LPERR10G05620 Leersia perrieri LPERR10G05620 N 0.000
Lus10001271.g Linum usitatissimum Lus10001271.g N 0.000
Lus10009475.g Linum usitatissimum Lus10009475.g N 0.000
Lus10010101.g Linum usitatissimum Lus10010101.g N 0.000
Lus10012603.g Linum usitatissimum Lus10012603.g N 0.000
MDP0000321049 Malus domestica MDP0000321049 N 0.000
MDP0000829998 Malus domestica MDP0000829998 N 0.000
mgf017530m Mimulus guttatus mgf017530m N 0.000
MLOC_55870 Hordeum vulgare MLOC_55870 N 0.000
MLOC_60291 Hordeum vulgare MLOC_60291 N 0.000
MTR_8g024210 Medicago truncatula MTR_8g024210 N 0.000
OB02G40170 Oryza brachyantha OB02G40170 N 0.000
OB03G11710 Oryza brachyantha OB03G11710 N 0.000
OB03G16590 Oryza brachyantha OB03G16590 N 0.000
OB10G16200 Oryza brachyantha OB10G16200 N 0.000
OBART02G33270 Oryza barthii OBART02G33270 N 0.000
OBART03G01740 Oryza barthii OBART03G01740 N 0.000
OBART10G08120 Oryza barthii OBART10G08120 N 0.000
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N 0.000
OGLUM03G01710 Oryza glumaepatula OGLUM03G01710 N 0.000
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N 0.000
OMERI02G31750 Oryza meridionalis OMERI02G31750 N 0.000
OMERI03G01680 Oryza meridionalis OMERI03G01680 N 0.000
ONIVA02G30660 Oryza nivara ONIVA02G30660 N 0.000
ONIVA02G35790 Oryza nivara ONIVA02G35790 N 0.000
ONIVA10G07810 Oryza nivara ONIVA10G07810 N 0.000
OPUNC02G30580 Oryza punctata OPUNC02G30580 N 0.000
OPUNC03G01600 Oryza punctata OPUNC03G01600 N 0.000
OPUNC03G06240 Oryza punctata OPUNC03G06240 N 0.000
OPUNC10G07050 Oryza punctata OPUNC10G07050 N 0.000
orange1.1g013752m.g Citrus sinensis orange1.1g013752m.g N 0.000
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N 0.000
ORGLA03G0015000 Oryza glaberrima ORGLA03G0015000 N 0.000
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N 0.000
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N 0.000
ORUFI03G01470 Oryza rufipogon ORUFI03G01470 N 0.000
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N 0.000
OS03G0122100 Oryza sativa OS03G0122100 N 0.000
OS10G0376900 Oryza sativa OS10G0376900 N 0.000
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N 0.000
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N 0.000
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N 0.000
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N 0.000
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N 0.000
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N 0.000
Pavir.J40759 Panicum virgatum Pavir.J40759 N 0.000
PGSC0003DMG400016145 Solanum tuberosum PGSC0003DMG400016145 N 0.000
PK21055.1 Cannabis sativa PK21055.1 N 0.000
Pm028748 Prunus mume Pm028748 N 0.000
POPTR_0002s18100 Populus trichocarpa POPTR_0002s18100 N 0.000
POPTR_0014s10190 Populus trichocarpa POPTR_0014s10190 N 0.000
PRUPE_ppa006041mg Prunus persica PRUPE_ppa006041mg N 0.000
SapurV1A.0003s0430 Salix purpurea SapurV1A.0003s0430 N 0.000
SapurV1A.0151s0200 Salix purpurea SapurV1A.0151s0200 N 0.000
SapurV1A.0162s0340 Salix purpurea SapurV1A.0162s0340 N 0.000
Sb0012s004780 Sorghum bicolor Sb0012s004780 N 0.000
Sb01g044640 Sorghum bicolor Sb01g044640 N 0.000
Sb01g049080 Sorghum bicolor Sb01g049080 N 0.000
Sb04g027280 Sorghum bicolor Sb04g027280 N 0.000
scaffold_403653.1 Arabidopsis lyrata scaffold_403653.1 N 0.000
Si017701m.g Setaria italica Si017701m.g N 0.000
Si036568m.g Setaria italica Si036568m.g N 0.000
Si038653m.g Setaria italica Si038653m.g N 0.000
Si040271m.g Setaria italica Si040271m.g N 0.000
Solyc11g010340.1 Solanum lycopersicum Solyc11g010340.1 N 0.000
TCM_001031 Theobroma cacao TCM_001031 N 0.000
TCM_005028 Theobroma cacao TCM_005028 N 0.000
Thhalv10006045m.g Eutrema salsugineum Thhalv10006045m.g N 0.000
VIT_15s0048g02510 Vitis vinifera VIT_15s0048g02510 N 0.000