ONIVA08G22830 (Oryza nivara)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02178 (AT_hook) IPR017956 ONIVA08G22830 T017674_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AHL13
M01672_2.00 		Arabidopsis thaliana
NAWWTAWWWN
NWWWTAWWTN		 PBM
Weirauch et al.(2014)
pTH8202 		0.991 0.692
BRADI3G55950
M01673_2.00 		Brachypodium distachyon
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH9369 		0.991 0.692
OS02G0824300
M01688_2.00 		Oryza sativa
NNDWAWWN
NWWTWHNN		 PBM
Weirauch et al.(2014)
pTH8406 		0.991 0.692
VIT_08s0007g04020
M01689_2.00 		Vitis vinifera
DBNDDDDDDN
NHHHHHHNVH		 PBM
Weirauch et al.(2014)
pTH9295 		0.991 0.654
FGRRES_17512
M01105_2.00 		Fusarium graminearum
NNNDNWWWW
WWWWNHNNN		 PBM
Lambert et al.(2019)
pTH11412 		0.991 0.538
TVAG_474020
M01106_2.00 		Trichomonas vaginalis
DNWWWAWW
WWTWWWNH		 PBM
Lambert et al.(2019)
pTH11493 		0.991 0.500
HMGA1
M09769_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_01 		0.991 0.436
HMGA1
M09770_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_Q4 		0.991 0.436
MTR_4g101990
M01687_2.00 		Medicago truncatula
AAAWTAAT
ATTAWTTT		 PBM
Weirauch et al.(2014)
pTH9209 		0.991 0.423
PK00377.1
M01107_2.00 		Cannabis sativa
DAWWWAWW
WWTWWWTH		 PBM
Lambert et al.(2019)
pTH11338 		0.991 0.423
ENSPPYG00000004736
M01685_2.00 		Pongo abelii
NNNNDWWW
WWWHNNNN		 PBM
Weirauch et al.(2014)
pTH9279 		0.991 0.421
Hmga2
M00751_2.00 		Mus musculus
NNNNRHWWNN
NNWWDYNNNN		 PBM
Weirauch et al.(2013)
pTH3046 		0.991 0.410
HMGA2
M09771_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGA2_01 		0.991 0.410
SUM1
M00008_2.00 		Saccharomyces cerevisiae
NNDWWWH
DWWWHNN		 PBM
Badis et al.(2008)
SUM1_2124 		0.991 0.385
SUM1
M07439_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1 		0.991 0.385
SUM1
M08478_2.00 		Saccharomyces cerevisiae
RYGWCASWAAW
WTTWSTGWCRY		 Misc
DeBoer et al.(2011)
YDR310C_383 		0.991 0.385
SUM1
M08479_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 Misc
DeBoer et al.(2011)
YDR310C_478 		0.991 0.385
ANIA_01690
M01675_2.00 		Aspergillus nidulans
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH8216 		0.991 0.351
BRADI5G22430
M01674_2.00 		Brachypodium distachyon
VNRDDDHDD
HHDHHHYNB		 PBM
Weirauch et al.(2014)
pTH9242 		0.991 0.346
Q7DLU9_PEA
M09772_2.00 		Pisum sativum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HMGIY_01 		0.991 0.346
NCU05635
M01694_2.00 		Neurospora crassa
NNNWWWWNNN
NNNWWWWNNN		 PBM
Weirauch et al.(2014)
pTH8863 		0.991 0.316
Setbp1
M01683_2.00 		Mus musculus
NDNNNNNNHN
NDNNNNNNHN		 PBM
Weirauch et al.(2014)
pTH1294 		0.991 0.308
Ahctf1
M00750_2.00 		Mus musculus
AAAWAWAW
ATWTWTTT		 PBM
Weirauch et al.(2013)
pTH2361 		0.991 0.308
Xrp1
M01686_2.00 		Drosophila melanogaster
NNNNDWAWW
WWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH9260 		0.991 0.308
PK26376.1
M01108_2.00 		Cannabis sativa
DDWWWAWW
WWTWWWHH		 PBM
Lambert et al.(2019)
pTH11261 		0.991 0.308
Xrp1
M05900_2.00 		Drosophila melanogaster
RTKRYGYAAT
ATTRCRYMAY		 B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113 		0.991 0.308
ATEG_07399
M01676_2.00 		Aspergillus terreus
DHNNHNDWWW
WWWHNDNNDH		 PBM
Weirauch et al.(2014)
pTH9237 		0.991 0.269
ENSACAG00000014978
M01677_2.00 		Anolis carolinensis
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9222 		0.991 0.269
phf21ab
M01678_2.00 		Danio rerio
NNNDNADW
WHTNHNNN		 PBM
Weirauch et al.(2014)
pTH9254 		0.991 0.269
kmt2cb
M01679_2.00 		Danio rerio
WWAWAWAT
ATWTWTWW		 PBM
Weirauch et al.(2014)
pTH7876 		0.991 0.269
phf21ab
M01680_2.00 		Gasterosteus aculeatus
AAAAWAAA
TTTWTTTT		 PBM
Weirauch et al.(2014)
pTH9180 		0.991 0.269
PHF21A
M01681_2.00 		Meleagris gallopavo
HDNHNNDNHD
HDNHNNDNHD		 PBM
Weirauch et al.(2014)
pTH7875 		0.991 0.269
PHF21A
M01103_2.00 		Monodelphis domestica
NNNAWATWAATN
NATTWATWTNNN		 PBM
Lambert et al.(2019)
pTH9309 		0.991 0.269
PHF21A
M01682_2.00 		Monodelphis domestica
NNNNNHRH
DYDNNNNN		 PBM
Weirauch et al.(2014)
pTH9335 		0.991 0.269
Phf21a
M01684_2.00 		Mus musculus
NNNATATWAATN
NATTWATATNNN		 PBM
Weirauch et al.(2014)
pTH8550 		0.991 0.269
FGRRES_05233
M01104_2.00 		Fusarium graminearum
NNNDWWAWWH
DWWTWWHNNN		 PBM
Lambert et al.(2019)
pTH11377 		0.991 0.256
estExt_fgeneshNG_pg.C_820014
M01692_2.00 		Naegleria gruberi
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9380 		0.991 0.231
athp-3
M01691_2.00 		Caenorhabditis elegans
NNDDWDH
DHWHHNN		 PBM
Weirauch et al.(2014)
pTH9097 		0.991 0.226
HMG-I Y
M02652_2.00 		Pisum sativum
NDWVAAANRVMRWMAY
RTKWYKBYNTTTBWHN		 SELEX
Mathelier et al.(2014)
MA0045.1 		0.991 0.212
NCU01145
M01693_2.00 		Neurospora crassa
RWATAWWTNN
NNAWWTATWY		 PBM
Weirauch et al.(2014)
pTH8916 		0.991 0.210
HMGA
M01671_2.00 		Arabidopsis thaliana
NNNNDWAWH
DWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH7395 		0.991 0.192
hmg-12
M01690_2.00 		Caenorhabditis elegans
NNAWWTAWWTNN
NNAWWTAWWTNN		 PBM
Weirauch et al.(2014)
pTH8997 		0.991 0.148
SUM1
M01517_2.00 		Saccharomyces cerevisiae
NNNDWAWW
WWTWHNNN		 PBM
Zhu et al.(2009)
Sum1 		0.991 0.000
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA08G22830.1 AT hook 82 94
ONIVA08G22830.1 AT hook 141 153

Links

Other AT hook family TFs
Other Oryza nivara TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29736.m002013 Ricinus communis 29736.m002013 I
AMTR_s00010p00252990 Amborella trichopoda AMTR_s00010p00252990 I
Aquca_002_00543 Aquilegia coerulea Aquca_002_00543 I
BGIOSGA026188 Oryza indica BGIOSGA026188 I
Bo2g136560 Brassica oleracea Bo2g136560 I
Bo5g019500 Brassica oleracea Bo5g019500 I
Bo7g080730 Brassica oleracea Bo7g080730 I
Bostr.0556s0099 Boechera stricta Bostr.0556s0099 I
Bra019658 Brassica rapa Bra019658 I
Bra024804 Brassica rapa Bra024804 I
Cagra.0534s0022 Capsella grandiflora Cagra.0534s0022 I
Cagra.3501s0066 Capsella grandiflora Cagra.3501s0066 I
Carubv10011707m.g Capsella rubella Carubv10011707m.g I
Carubv10017119m.g Capsella rubella Carubv10017119m.g I
cassava35260.valid.m1 Manihot esculenta cassava35260.valid.m1 I
cassava39089.m1 Manihot esculenta cassava39089.m1 I
Ca_18779 Cicer arietinum Ca_18779 I
Ciclev10031405m.g Citrus clementina Ciclev10031405m.g I
Cla010333 Citrullus lanatus Cla010333 I
Cucsa.285270 Cucumis sativus Cucsa.285270 I
Eucgr.B03417 Eucalyptus grandis Eucgr.B03417 I
Eucgr.G02522 Eucalyptus grandis Eucgr.G02522 I
evm.TU.supercontig_183.27 Carica papaya evm.TU.supercontig_183.27 I
FLP Arabidopsis lyrata fgenesh2_kg.1__1561__AT1G14350.1 I
GLYMA01G05190 Glycine max GLYMA01G05190 I
GLYMA02G02310 Glycine max GLYMA02G02310 I
GLYMA08G40950 Glycine max GLYMA08G40950 I
GLYMA18G16040 Glycine max GLYMA18G16040 I
Gorai.005G139500 Gossypium raimondii Gorai.005G139500 I
Gorai.013G083300 Gossypium raimondii Gorai.013G083300 I
GRMZM2G064630 Zea mays GRMZM2G064630 I
GSMUA_Achr10G18880_001 Musa acuminata GSMUA_Achr10G18880_001 I
LPERR07G19800 Leersia perrieri LPERR07G19800 I
Lus10012847.g Linum usitatissimum Lus10012847.g I
Lus10030494.g Linum usitatissimum Lus10030494.g I
MDP0000165523 Malus domestica MDP0000165523 I
MDP0000210970 Malus domestica MDP0000210970 I
mgf009409m Mimulus guttatus mgf009409m I
MTR_5g038910 Medicago truncatula MTR_5g038910 I
MTR_8g468380 Medicago truncatula MTR_8g468380 I
MYB124 Arabidopsis thaliana AT1G14350 D
MYB88 Arabidopsis thaliana AT2G02820 D
MYB88 Arabidopsis lyrata fgenesh2_kg.5__181__AT2G02820.2 I
OB07G28520 Oryza brachyantha OB07G28520 I
OBART07G22930 Oryza barthii OBART07G22930 I
OGLUM07G22980 Oryza glumaepatula OGLUM07G22980 I
OPUNC07G21540 Oryza punctata OPUNC07G21540 I
orange1.1g044977m.g Citrus sinensis orange1.1g044977m.g I
ORGLA07G0179200 Oryza glaberrima ORGLA07G0179200 I
ORUFI07G24080 Oryza rufipogon ORUFI07G24080 I
OS07G0627300 Oryza sativa OS07G0627300 I
Pavir.Bb03405 Panicum virgatum Pavir.Bb03405 I
Pavir.J36475 Panicum virgatum Pavir.J36475 I
PDK_20s1473891g001 Phoenix dactylifera PDK_20s1473891g001 I
PGSC0003DMG400002828 Solanum tuberosum PGSC0003DMG400002828 I
PGSC0003DMG400025612 Solanum tuberosum PGSC0003DMG400025612 I
PGSC0003DMG400026758 Solanum tuberosum PGSC0003DMG400026758 I
PK05123.1 Cannabis sativa PK05123.1 I
Pm006532 Prunus mume Pm006532 I
POPTR_0008s14790 Populus trichocarpa POPTR_0008s14790 I
POPTR_0010s10310 Populus trichocarpa POPTR_0010s10310 I
PRUPE_ppa017536mg Prunus persica PRUPE_ppa017536mg I
SapurV1A.0062s0030 Salix purpurea SapurV1A.0062s0030 I
SapurV1A.0200s0020 Salix purpurea SapurV1A.0200s0020 I
Sb02g040050 Sorghum bicolor Sb02g040050 I
Si029124m.g Setaria italica Si029124m.g I
Solyc04g005710.1 Solanum lycopersicum Solyc04g005710.1 I
Solyc05g007160.2 Solanum lycopersicum Solyc05g007160.2 I
TCM_011776 Theobroma cacao TCM_011776 I
Thhalv10004109m.g Eutrema salsugineum Thhalv10004109m.g I
Thhalv10007659m.g Eutrema salsugineum Thhalv10007659m.g I
Traes_2AS_1161E1D2E Triticum aestivum Traes_2AS_1161E1D2E I
Traes_2BS_F1B450FA4 Triticum aestivum Traes_2BS_F1B450FA4 I
Traes_2DS_9430AAD52 Triticum aestivum Traes_2DS_9430AAD52 I
VIT_01s0026g01910 Vitis vinifera VIT_01s0026g01910 I