CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART03G26230
(
Oryza barthii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OBART03G26230
T019982_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART03G26230.1
B3
29
119
FVRRMTADSRRSMIMPCKFVNHFGGDFSGTIKLQSPNGILYVVEVTKCKNKTVLRCGWEAFVDAHHIEENDSLLFRRVENSRFEVLIFDSD
OBART03G26230.1
B3
209
310
FVAIMRKSNVQLPTPFLVISFCYAEVHFPHKSVTVTLQRPCKSKKWHPRFYKRKDARMNILRGSWVEFVKDNRVQEQDICVFVPTKDARRNFTFTVHLLRVA
OBART03G26230.1
B3
407
502
YVAIMKKSNVERSASRCQLELGARFAAAVHLPDRRQTVVLQRRGERWATVMQIRSGTRRLLISGWHRFVRDNRLRVGDICLFEFKTHERWRLTMAT
OBART03G26230.1
B3
733
823
FLRRMAADSMHSMIMPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTLLQCGWEAFVDAHNIKEGESLLFRHIENSRYEVLILDSD
OBART03G26230.1
B3
934
1034
FVAVMKKCNLQSPAPYLVISSRYASVHFPRETATITLQRPSKRKKWYPRFYKRIDKSDHMLRGQWQNFVHDNCLQEEDICLFVPTKGGRNFVFTVHLLQAE
OBART03G26230.1
B3
1142
1232
KGKFRGLELSSRYAASYLPDKNHQTLVLQCKGMIWQINLVVLRRYTKGKRWFLTAGWRKFAHDNRLRVGDFCLFELKKKKKLTMEVHIISN
OBART03G26230.1
B3
1264
1355
CFLIRMTTDSMHSMIIPDRFVNHFGGKIPGTIKLESPNGILYVVEVTECMNKTVIQCGWEAFVDAHHIKVGDSLLFRHIENSCFEVMILDSD
OBART03G26230.1
B3
1499
1592
GLTSSPCQLELGARYAAAVHLPDRRQAVVLQRMGQRWDTVMQTKSGRCTTRRFLINGWRRFVRDNRLCVGDICLLELKKHESKLTMTVHTIFSQ
Links
Other
B3
family TFs
Other
Oryza barthii
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_022274
Oryza longistaminata
OLONG_022274
N
0.915
ONIVA03G27260
Oryza nivara
ONIVA03G27260
N
0.974