CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART07G05360
(
Oryza barthii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OBART07G05360
T020013_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART07G05360.1
B3
116
215
FVKTLMSSDAEYRDRFAVPMDVAKDVFPPLVDAKAVQPLIVKDLQGSPMTFDYGRNGNRVTLAKVWKKFRDDMDFVDGDNVIFMRRRDDDELYVGVRRQR
OBART07G05360.1
B3
491
590
FVKPLTCTDAVKNRYRFIVPKREAAMGVLPQLQLNEHVPLYIKDMHGKEWVINYTWKEYTHMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRT
OBART07G05360.1
B3
841
923
FDGATFLSKPWLALPCDGPMPLIVKDLQGSPMTFDYGRNGNRVTLAKVWKKFRDDMDFVDGDNVIFMRRRDDDELYVGVRRQR
OBART07G05360.1
B3
1188
1287
FVKPLTCTDAVKNRYRFIVPKREAAMGVLPQLQLNEHVPLYIKDMHGKEWVINYTWKEYTHMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRT
OBART07G05360.3
B3
118
221
FVKTLMISDFDFRIRFSAPMADAKGVFPPLVDAKAVQPLLVKDLHGSPMTFDYGRKSKRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRSQR
Links
Other
B3
family TFs
Other
Oryza barthii
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30076.m004701
Ricinus communis
30076.m004701
N
cassava28223.m1
Manihot esculenta
cassava28223.m1
N
Lus10010027.g
Linum usitatissimum
Lus10010027.g
N
Lus10036329.g
Linum usitatissimum
Lus10036329.g
N
POPTR_0014s11940
Populus trichocarpa
POPTR_0014s11940
N
SapurV1A.0052s0100
Salix purpurea
SapurV1A.0052s0100
N
SapurV1A.0158s0510
Salix purpurea
SapurV1A.0158s0510
N
SapurV1A.0494s0210
Salix purpurea
SapurV1A.0494s0210
N