CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10010027.g
(
Linum usitatissimum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Lus10010027.g
T196629_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10010027
GATA
26
61
CIDCHTTTTPCWRGGPAGPRTLCNACGIRYRKSRNA
Links
Other
GATA
family TFs
Other
Linum usitatissimum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10036329.g
Linum usitatissimum
Lus10036329.g
N
0.867
POPTR_0002s20080
Populus trichocarpa
POPTR_0002s20080
N
0.827
POPTR_0014s11940
Populus trichocarpa
POPTR_0014s11940
N
0.827
SapurV1A.0052s0100
Salix purpurea
SapurV1A.0052s0100
N
0.827
SapurV1A.0158s0510
Salix purpurea
SapurV1A.0158s0510
N
0.827
SapurV1A.0494s0210
Salix purpurea
SapurV1A.0494s0210
N
0.827
30076.m004701
Ricinus communis
30076.m004701
N
0.825
cassava28223.m1
Manihot esculenta
cassava28223.m1
N
0.825