CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30076.m004701
(
Ricinus communis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
30076.m004701
T195998_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30076.m004701
GATA
31
66
CIDCQTTRTPCWRSGPAGPKTLCNACGIRYRKKSRR
Links
Other
GATA
family TFs
Other
Ricinus communis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava28223.m1
Manihot esculenta
cassava28223.m1
N
0.865
POPTR_0014s11940
Populus trichocarpa
POPTR_0014s11940
N
0.838
SapurV1A.0052s0100
Salix purpurea
SapurV1A.0052s0100
N
0.838
SapurV1A.0158s0510
Salix purpurea
SapurV1A.0158s0510
N
0.838
SapurV1A.0494s0210
Salix purpurea
SapurV1A.0494s0210
N
0.838
Lus10010027.g
Linum usitatissimum
Lus10010027.g
N
0.825
Lus10036329.g
Linum usitatissimum
Lus10036329.g
N
0.825
POPTR_0002s20080
Populus trichocarpa
POPTR_0002s20080
N
0.811