CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA03G27270
(
Oryza nivara
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
ONIVA03G27270
T020304_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA03G27270.1
B3
101
191
FHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSD
ONIVA03G27270.1
B3
320
421
FVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCWKKFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRET
ONIVA03G27270.1
B3
488
578
YVSIMNKSNVGTDGLYIIIFGRQFATRYLPEGEQTLTLLMTGKSAWQVKMRPRSGDAKMITTGWRHFVHDNHLQIEDICLFQLMNDEIHMA
ONIVA03G27270.1
B3
605
695
FHRQMSANFEHSMIIPNKFLNQFGGKISRTVELESPKGNVYVVKVSKHMNKAVLQCGWEAFVDAHQIEENDSLLFRHIENSRFAVLILDSD
ONIVA03G27270.1
B3
819
920
YVTTMKHSNVNSHHASLVIAKHYACAYFPHTSQTITLKWHGKNRKWHPKFYIRKDQVGYILHGRWIDFVCHNHVKEGDICIFHLKNFNGRKFRATVHLLRET
ONIVA03G27270.1
B3
1030
1131
YVSIMNKSNVGTDGLYIITLGRQFATRYLPEGEQTLTLLTTGTGKAWQVKMRPRSGDARMFTLGWRDFVRDNLLQTEDICLFQLMKNSERGLAMKVHIIRHN
ONIVA03G27270.2
B3
101
191
FHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSD
ONIVA03G27270.2
B3
320
421
FVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCWKKFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRET
ONIVA03G27270.2
B3
450
559
VRRVSSRPYLTADRVSLTEEQVRKVEEVVHSIQSEGPMYVSIMNKSNVGTDGLYIIVKMRPRSGDARMFTLGWRDFVRDNLLQTEDICLFQLMKNSERGLAMKVHIIRHN
Links
Other
B3
family TFs
Other
Oryza nivara
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA013136
Oryza indica
BGIOSGA013136
N
0.798
OBART03G26240
Oryza barthii
OBART03G26240
N
0.801
OGLUM03G27140
Oryza glumaepatula
OGLUM03G27140
N
0.943
OLONG_026959
Oryza longistaminata
OLONG_026959
N
0.783
OMERI03G23710
Oryza meridionalis
OMERI03G23710
N
0.780
OPUNC03G23990
Oryza punctata
OPUNC03G23990
N
0.748
ORGLA03G0243900
Oryza glaberrima
ORGLA03G0243900
N
0.801
ORUFI03G27200
Oryza rufipogon
ORUFI03G27200
N
0.934