CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_051_00062
(
Aquilegia coerulea
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Aquca_051_00062
T022602_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF3
M00852_2.00
Arabidopsis thaliana
NKGTYBNN
NNVRACMN
PBM
Franco-Zorrilla et al.(2014)
ETTIN
0.888
0.888
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.735
0.735
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_051_00062.1
B3
151
253
FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSAFVNRKKLVSGDAVLFLRGEDGELRLGIRRAP
Links
Other
B3
family TFs
Other
Aquilegia coerulea
TFs
594 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29599.m000177
Ricinus communis
29599.m000177
I
0.704
29769.m000463
Ricinus communis
29769.m000463
I
0.714
29842.m003592
Ricinus communis
29842.m003592
N
0.000
29842.m003644
Ricinus communis
29842.m003644
N
0.000
30086.m000210
Ricinus communis
30086.m000210
N
0.000
30169.m006531
Ricinus communis
30169.m006531
N
0.000
AMTR_s00016p00168950
Amborella trichopoda
AMTR_s00016p00168950
I
0.711
AMTR_s00057p00119300
Amborella trichopoda
AMTR_s00057p00119300
N
0.000
AMTR_s00092p00072950
Amborella trichopoda
AMTR_s00092p00072950
I
0.704
AMTR_s00147p00088570
Amborella trichopoda
AMTR_s00147p00088570
N
0.000
Aquca_002_01425
Aquilegia coerulea
Aquca_002_01425
I
0.714
Aquca_003_00899
Aquilegia coerulea
Aquca_003_00899
I
0.701
Aquca_012_00145
Aquilegia coerulea
Aquca_012_00145
N
0.000
ARF11
Arabidopsis thaliana
AT2G46530
I
0.704
ARF16
Oryza indica
BGIOSGA022468
I
0.704
ARF6
Vitis vinifera
VIT_10s0003g04100
I
0.704
Bo4g136370
Brassica oleracea
Bo4g136370
I
0.704
Bostr.13158s0186
Boechera stricta
Bostr.13158s0186
I
0.704
Bostr.25993s0113
Boechera stricta
Bostr.25993s0113
I
0.704
Bostr.5325s0057
Boechera stricta
Bostr.5325s0057
N
0.000
Bostr.7867s0204
Boechera stricta
Bostr.7867s0204
I
0.714
Bostr.9638s0030
Boechera stricta
Bostr.9638s0030
I
0.704
Bra028110
Brassica rapa
Bra028110
I
0.704
BRADI3G04920
Brachypodium distachyon
BRADI3G04920
I
0.704
BRADI4G07470
Brachypodium distachyon
BRADI4G07470
I
0.704
BRADI5G25767
Brachypodium distachyon
BRADI5G25767
I
0.704
Cagra.0050s0046
Capsella grandiflora
Cagra.0050s0046
I
0.711
Cagra.0483s0062
Capsella grandiflora
Cagra.0483s0062
I
0.704
Cagra.1968s0081
Capsella grandiflora
Cagra.1968s0081
N
0.000
Cagra.6767s0001
Capsella grandiflora
Cagra.6767s0001
I
0.704
Carubv10004139m.g
Capsella rubella
Carubv10004139m.g
I
0.704
Carubv10011382m.g
Capsella rubella
Carubv10011382m.g
N
0.000
Carubv10018954m.g
Capsella rubella
Carubv10018954m.g
I
0.704
Carubv10022841m.g
Capsella rubella
Carubv10022841m.g
I
0.711
cassava10382.m1
Manihot esculenta
cassava10382.m1
N
0.000
cassava11157.m1
Manihot esculenta
cassava11157.m1
N
0.000
cassava23225.valid.m1
Manihot esculenta
cassava23225.valid.m1
N
0.000
cassava23226.valid.m1
Manihot esculenta
cassava23226.valid.m1
N
0.000
cassava2408.valid.m1
Manihot esculenta
cassava2408.valid.m1
I
0.704
cassava24285.valid.m1
Manihot esculenta
cassava24285.valid.m1
N
0.000
cassava24286.valid.m1
Manihot esculenta
cassava24286.valid.m1
N
0.000
cassava30265.valid.m1
Manihot esculenta
cassava30265.valid.m1
I
0.714
cassava30266.valid.m1
Manihot esculenta
cassava30266.valid.m1
I
0.714
cassava35541.valid.m1
Manihot esculenta
cassava35541.valid.m1
I
0.714
cassava42787.valid.m1
Manihot esculenta
cassava42787.valid.m1
I
0.704
cassava42788.valid.m1
Manihot esculenta
cassava42788.valid.m1
I
0.704
cassava42789.valid.m1
Manihot esculenta
cassava42789.valid.m1
I
0.704
cassava43609.valid.m1
Manihot esculenta
cassava43609.valid.m1
I
0.714
cassava45422.m1
Manihot esculenta
cassava45422.m1
I
0.704
cassava45423.m1
Manihot esculenta
cassava45423.m1
I
0.704
cassava45424.m1
Manihot esculenta
cassava45424.m1
I
0.704
cassava45425.m1
Manihot esculenta
cassava45425.m1
I
0.704
cassava45426.m1
Manihot esculenta
cassava45426.m1
I
0.704
cassava4691.m1
Manihot esculenta
cassava4691.m1
N
0.000
Ca_00467
Cicer arietinum
Ca_00467
I
0.710
Ca_02516
Cicer arietinum
Ca_02516
N
0.708
Ca_08872
Cicer arietinum
Ca_08872
I
0.714
Ca_15694
Cicer arietinum
Ca_15694
I
0.704
chr2.CM0201.60.nd
Lotus japonicus
chr2.CM0201.60.nd
I
0.703
chr4.CM0006.290.nc
Lotus japonicus
chr4.CM0006.290.nc
I
0.701
Ciclev10011065m.g
Citrus clementina
Ciclev10011065m.g
I
0.714
Ciclev10014200m.g
Citrus clementina
Ciclev10014200m.g
I
0.704
Ciclev10017220m.g
Citrus clementina
Ciclev10017220m.g
N
0.000
Cla005884
Citrullus lanatus
Cla005884
I
0.704
Cla013021
Citrullus lanatus
Cla013021
I
0.714
Cla019844
Citrullus lanatus
Cla019844
I
0.714
Cucsa.071070
Cucumis sativus
Cucsa.071070
I
0.704
Cucsa.078800
Cucumis sativus
Cucsa.078800
I
0.714
Cucsa.152170
Cucumis sativus
Cucsa.152170
I
0.714
estExt_fgenesh1_pg.C_1630077
Physcomitrella patens
estExt_fgenesh1_pg.C_1630077
I
0.701
ETC1
Arabidopsis lyrata
Al_scaffold_0001_92
N
0.000
ETC1
Arabidopsis thaliana
AT1G01380
N
0.000
Eucgr.A01720
Eucalyptus grandis
Eucgr.A01720
N
0.000
Eucgr.A02065
Eucalyptus grandis
Eucgr.A02065
I
0.701
Eucgr.D01323
Eucalyptus grandis
Eucgr.D01323
N
0.000
Eucgr.D01764
Eucalyptus grandis
Eucgr.D01764
I
0.704
Eucgr.E00888
Eucalyptus grandis
Eucgr.E00888
I
0.704
Eucgr.K00332
Eucalyptus grandis
Eucgr.K00332
N
0.000
Eucgr.K00803
Eucalyptus grandis
Eucgr.K00803
N
0.000
evm.TU.contig_29502
Carica papaya
evm.TU.contig_29502
N
0.000
evm.TU.supercontig_17.53
Carica papaya
evm.TU.supercontig_17.53
I
0.701
evm.TU.supercontig_96.40
Carica papaya
evm.TU.supercontig_96.40
I
0.714
e_gw1.65.212.1
Physcomitrella patens
e_gw1.65.212.1
I
0.701
F775_09991
Aegilops tauschii
F775_09991
I
0.704
gene12917-v1.0-hybrid
Fragaria vesca
gene12917-v1.0-hybrid
I
0.714
gene19138-v1.0-hybrid
Fragaria vesca
gene19138-v1.0-hybrid
I
0.714
gene22728-v1.0-hybrid
Fragaria vesca
gene22728-v1.0-hybrid
I
0.701
gene23919-v1.0-hybrid
Fragaria vesca
gene23919-v1.0-hybrid
N
0.000
gene25123-v1.0-hybrid
Fragaria vesca
gene25123-v1.0-hybrid
I
0.704
gene30394-v1.0-hybrid
Fragaria vesca
gene30394-v1.0-hybrid
I
0.704
gene31631-v1.0-hybrid
Fragaria vesca
gene31631-v1.0-hybrid
I
0.714
GLYMA02G45100
Glycine max
GLYMA02G45100
I
0.701
GLYMA05G27580
Glycine max
GLYMA05G27580
I
0.704
GLYMA06G45941
Glycine max
GLYMA06G45941
N
0.000
GLYMA08G10550
Glycine max
GLYMA08G10550
I
0.704
GLYMA12G10790
Glycine max
GLYMA12G10790
N
0.000
GLYMA12G32130
Glycine max
GLYMA12G32130
N
0.000
GLYMA13G17270
Glycine max
GLYMA13G17270
I
0.701
GLYMA14G03650
Glycine max
GLYMA14G03650
I
0.701
GLYMA17G05220
Glycine max
GLYMA17G05220
I
0.701
GLYMA18G05330
Glycine max
GLYMA18G05330
I
0.704
Gorai.001G153900
Gossypium raimondii
Gorai.001G153900
I
0.704
Gorai.002G083400
Gossypium raimondii
Gorai.002G083400
N
0.000
Gorai.003G078000
Gossypium raimondii
Gorai.003G078000
I
0.714
Gorai.007G026900
Gossypium raimondii
Gorai.007G026900
I
0.714
Gorai.007G131900
Gossypium raimondii
Gorai.007G131900
I
0.704
Gorai.008G054600
Gossypium raimondii
Gorai.008G054600
I
0.704
Gorai.008G097200
Gossypium raimondii
Gorai.008G097200
I
0.704
Gorai.008G126200
Gossypium raimondii
Gorai.008G126200
I
0.704
Gorai.008G172400
Gossypium raimondii
Gorai.008G172400
N
0.000
Gorai.009G152700
Gossypium raimondii
Gorai.009G152700
I
0.704
Gorai.010G252300
Gossypium raimondii
Gorai.010G252300
N
0.000
Gorai.010G253000
Gossypium raimondii
Gorai.010G253000
N
0.000
GRMZM2G028980
Zea mays
GRMZM2G028980
I
0.704
GRMZM2G160005
Zea mays
GRMZM2G160005
I
0.704
GSMUA_Achr10G09220_001
Musa acuminata
GSMUA_Achr10G09220_001
N
0.000
GSMUA_Achr10G15100_001
Musa acuminata
GSMUA_Achr10G15100_001
I
0.711
GSMUA_Achr4G25960_001
Musa acuminata
GSMUA_Achr4G25960_001
I
0.704
GSMUA_Achr5G26580_001
Musa acuminata
GSMUA_Achr5G26580_001
I
0.701
GSMUA_Achr7G24330_001
Musa acuminata
GSMUA_Achr7G24330_001
I
0.704
LjSGA_059323.1
Lotus japonicus
LjSGA_059323.1
I
0.714
LjSGA_069146.1
Lotus japonicus
LjSGA_069146.1
I
0.701
LPERR06G05720
Leersia perrieri
LPERR06G05720
I
0.704
Lus10007386.g
Linum usitatissimum
Lus10007386.g
I
0.714
Lus10010969.g
Linum usitatissimum
Lus10010969.g
I
0.714
Lus10020804.g
Linum usitatissimum
Lus10020804.g
I
0.714
Lus10031354.g
Linum usitatissimum
Lus10031354.g
I
0.714
MDP0000139073
Malus domestica
MDP0000139073
I
0.704
MDP0000153538
Malus domestica
MDP0000153538
I
0.701
MDP0000194603
Malus domestica
MDP0000194603
I
0.714
MDP0000216918
Malus domestica
MDP0000216918
N
0.000
MDP0000232417
Malus domestica
MDP0000232417
I
0.704
MDP0000268306
Malus domestica
MDP0000268306
I
0.704
MDP0000270078
Malus domestica
MDP0000270078
N
0.000
MDP0000319957
Malus domestica
MDP0000319957
I
0.701
MDP0000499190
Malus domestica
MDP0000499190
N
0.000
MDP0000876321
Malus domestica
MDP0000876321
I
0.704
MDP0000886637
Malus domestica
MDP0000886637
I
0.704
mgf003543m
Mimulus guttatus
mgf003543m
I
0.704
mgf005549m
Mimulus guttatus
mgf005549m
I
0.714
mgf005961m
Mimulus guttatus
mgf005961m
I
0.704
mgf009009m
Mimulus guttatus
mgf009009m
N
0.000
MLOC_51932
Hordeum vulgare
MLOC_51932
I
0.704
MLOC_66152
Hordeum vulgare
MLOC_66152
I
0.704
MTR_4g046737
Medicago truncatula
MTR_4g046737
N
0.000
MTR_8g101360
Medicago truncatula
MTR_8g101360
I
0.704
OB06G15720
Oryza brachyantha
OB06G15720
I
0.704
OBART06G06150
Oryza barthii
OBART06G06150
I
0.704
OGLUM06G06490
Oryza glumaepatula
OGLUM06G06490
I
0.704
OLONG_009780
Oryza longistaminata
OLONG_009780
I
0.704
OLONG_013033
Oryza longistaminata
OLONG_013033
I
0.700
OMERI03G32190
Oryza meridionalis
OMERI03G32190
I
0.704
ONIVA06G07160
Oryza nivara
ONIVA06G07160
I
0.704
OPUNC06G05940
Oryza punctata
OPUNC06G05940
I
0.704
orange1.1g002390m.g
Citrus sinensis
orange1.1g002390m.g
I
0.704
orange1.1g003544m.g
Citrus sinensis
orange1.1g003544m.g
I
0.714
ORGLA06G0056900
Oryza glaberrima
ORGLA06G0056900
I
0.704
ORUFI06G06450
Oryza rufipogon
ORUFI06G06450
I
0.704
OS06G0196700
Oryza sativa
OS06G0196700
I
0.704
Pavir.Aa03303
Panicum virgatum
Pavir.Aa03303
I
0.714
Pavir.Ab00451
Panicum virgatum
Pavir.Ab00451
I
0.714
Pavir.Da00065
Panicum virgatum
Pavir.Da00065
I
0.714
Pavir.Db00366
Panicum virgatum
Pavir.Db00366
I
0.714
PDK_20s1307674g001
Phoenix dactylifera
PDK_20s1307674g001
N
0.000
PDK_20s1335581g001
Phoenix dactylifera
PDK_20s1335581g001
N
0.000
PGSC0003DMG400028826
Solanum tuberosum
PGSC0003DMG400028826
I
0.701
PK11198.1
Cannabis sativa
PK11198.1
N
0.000
PK26077.1
Cannabis sativa
PK26077.1
I
0.704
PK27862.1
Cannabis sativa
PK27862.1
I
0.701
Pm009748
Prunus mume
Pm009748
N
0.000
Pm010467
Prunus mume
Pm010467
I
0.704
Pm014818
Prunus mume
Pm014818
I
0.701
Pm018352
Prunus mume
Pm018352
I
0.714
Pm019941
Prunus mume
Pm019941
I
0.704
POPTR_0001s13110
Populus trichocarpa
POPTR_0001s13110
I
0.711
POPTR_0001s36900
Populus trichocarpa
POPTR_0001s36900
I
0.701
POPTR_0002s05590
Populus trichocarpa
POPTR_0002s05590
I
0.711
POPTR_0003s16210
Populus trichocarpa
POPTR_0003s16210
I
0.701
POPTR_0004s02060
Populus trichocarpa
POPTR_0004s02060
N
0.000
POPTR_0005s22930
Populus trichocarpa
POPTR_0005s22930
I
0.711
POPTR_0007s02510
Populus trichocarpa
POPTR_0007s02510
N
0.000
POPTR_0011s00390
Populus trichocarpa
POPTR_0011s00390
N
0.000
POPTR_0012s01420
Populus trichocarpa
POPTR_0012s01420
N
0.000
POPTR_0015s02310
Populus trichocarpa
POPTR_0015s02310
N
0.000
POPTR_0017s06470
Populus trichocarpa
POPTR_0017s06470
N
0.000
PRUPE_ppa001069mg
Prunus persica
PRUPE_ppa001069mg
I
0.701
PRUPE_ppa001179mg
Prunus persica
PRUPE_ppa001179mg
I
0.704
PRUPE_ppa014728mg
Prunus persica
PRUPE_ppa014728mg
N
0.000
PRUPE_ppa023926mg
Prunus persica
PRUPE_ppa023926mg
N
0.000
SapurV1A.0030s0180
Salix purpurea
SapurV1A.0030s0180
I
0.704
SapurV1A.0076s0280
Salix purpurea
SapurV1A.0076s0280
I
0.701
SapurV1A.0147s0210
Salix purpurea
SapurV1A.0147s0210
I
0.714
SapurV1A.0345s0340
Salix purpurea
SapurV1A.0345s0340
N
0.000
SapurV1A.0346s0010
Salix purpurea
SapurV1A.0346s0010
N
0.000
SapurV1A.0377s0050
Salix purpurea
SapurV1A.0377s0050
N
0.000
SapurV1A.0499s0060
Salix purpurea
SapurV1A.0499s0060
I
0.701
SapurV1A.0610s0050
Salix purpurea
SapurV1A.0610s0050
N
0.000
SapurV1A.0722s0160
Salix purpurea
SapurV1A.0722s0160
N
0.000
SapurV1A.0779s0100
Salix purpurea
SapurV1A.0779s0100
N
0.000
SapurV1A.0928s0060
Salix purpurea
SapurV1A.0928s0060
N
0.000
SapurV1A.1106s0040
Salix purpurea
SapurV1A.1106s0040
N
0.000
SapurV1A.1227s0050
Salix purpurea
SapurV1A.1227s0050
N
0.000
SapurV1A.1257s0090
Salix purpurea
SapurV1A.1257s0090
I
0.704
Sb04g004430
Sorghum bicolor
Sb04g004430
I
0.704
Sb10g006440
Sorghum bicolor
Sb10g006440
I
0.704
SELMODRAFT_181404
Selaginella moellendorffii
SELMODRAFT_181404
I
0.704
SELMODRAFT_182255
Selaginella moellendorffii
SELMODRAFT_182255
I
0.704
Solyc07g052490.2
Solanum lycopersicum
Solyc07g052490.2
N
0.000
Solyc08g008380.2
Solanum lycopersicum
Solyc08g008380.2
I
0.704
Solyc12g006340.1
Solanum lycopersicum
Solyc12g006340.1
I
0.714
TCM_001906
Theobroma cacao
TCM_001906
I
0.704
TCM_011327
Theobroma cacao
TCM_011327
N
0.000
TCM_015351
Theobroma cacao
TCM_015351
N
0.000
TCM_016500
Theobroma cacao
TCM_016500
I
0.704
TCM_017488
Theobroma cacao
TCM_017488
I
0.704
TCM_029410
Theobroma cacao
TCM_029410
I
0.704
TCM_030163
Theobroma cacao
TCM_030163
N
0.000
TCM_030224
Theobroma cacao
TCM_030224
N
0.000
TCM_046858
Theobroma cacao
TCM_046858
N
0.000
Thhalv10024554m.g
Eutrema salsugineum
Thhalv10024554m.g
I
0.714
Traes_2AL_A7941CB12
Triticum aestivum
Traes_2AL_A7941CB12
I
0.704
Traes_2DL_8434C0251
Triticum aestivum
Traes_2DL_8434C0251
I
0.704
Traes_3DL_BC7A7E056
Triticum aestivum
Traes_3DL_BC7A7E056
I
0.704
Traes_6AS_10D92215D
Triticum aestivum
Traes_6AS_10D92215D
I
0.714
Traes_6BS_BD894AD26
Triticum aestivum
Traes_6BS_BD894AD26
I
0.704
Traes_6DS_F95C12EBB
Triticum aestivum
Traes_6DS_F95C12EBB
I
0.704
Traes_7BL_66296695F
Triticum aestivum
Traes_7BL_66296695F
I
0.714
Traes_7DL_C89614A4D
Triticum aestivum
Traes_7DL_C89614A4D
I
0.714
TRIUR3_28948
Triticum urartu
TRIUR3_28948
I
0.714
VIT_02s0025g01740
Vitis vinifera
VIT_02s0025g01740
I
0.704
VIT_10s0116g00500
Vitis vinifera
VIT_10s0116g00500
N
0.000
VIT_10s0116g01760
Vitis vinifera
VIT_10s0116g01760
N
0.000
VIT_11s0065g00310
Vitis vinifera
VIT_11s0065g00310
I
0.714
VIT_12s0028g01170
Vitis vinifera
VIT_12s0028g01170
I
0.701
VIT_12s0059g02360
Vitis vinifera
VIT_12s0059g02360
N
0.000
VIT_15s0046g00290
Vitis vinifera
VIT_15s0046g00290
I
0.704