CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Bb03754
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Bb03754
T023791_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Bb03754.1.p
B3
360
461
FEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGRPLTIQDARGKEWHFQFRFWPNNNSRMYVLEGVTPCIQSLQLQAGDTVTFSRIEPGGKLVMGFRKAT
Pavir.Bb03754.2.p
B3
360
461
FEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGRPLTIQDARGKEWHFQFRFWPNNNSRMYVLEGVTPCIQSLQLQAGDTVTFSRIEPGGKLVMGFRKAT
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
182 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh3_kg.1__236__4585_0_CCPA2104.b1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.1__236__4585_0_CCPA2104.b1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
HETIRDRAFT_166553
Heterobasidion irregulare
HETIRDRAFT_166553
N
OTX2
Myotis lucifugus
ENSMLUG00000022591
I
PEQ_0000660801
Parascaris equorum
PEQ_0000660801
I
SVUK_0002108701
Strongylus vulgaris
SVUK_0002108701
N
TCNE_0000507501
Toxocara canis
TCNE_0000507501
N
WUBG_02624
Wuchereria bancrofti
WUBG_02624
N